Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL121890.3-201ENST00000618494 516 ntBASIC7.36□□□□□ -1.23
CLIP1P30622 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.36□□□□□ -1.23
CLIP1P30622 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP1P30622 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP1P30622 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP1P30622 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CLIP1P30622 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 OR1F12-201ENST00000402365 945 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP1P30622 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP1P30622 TDGF1P1-201ENST00000445734 527 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 AC011276.1-201ENST00000469688 323 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP1P30622 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.35□□□□□ -1.23
CLIP1P30622 AC084783.1-201ENST00000565846 910 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 AC069061.3-201ENST00000582254 823 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 AC002044.3-201ENST00000623314 541 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP1P30622 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CLIP1P30622 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP1P30622 RPL7AP25-201ENST00000423357 805 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP1P30622 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.35□□□□□ -1.23
CLIP1P30622 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.35□□□□□ -1.23
CLIP1P30622 AL935212.3-201ENST00000450729 284 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CLIP1P30622 AP000756.2-201ENST00000624168 2567 ntBASIC7.35□□□□□ -1.23
CLIP1P30622 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CLIP1P30622 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.34□□□□□ -1.23
CLIP1P30622 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLIP1P30622 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CLIP1P30622 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CLIP1P30622 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.34□□□□□ -1.23
CLIP1P30622 RN7SKP227-201ENST00000364445 330 ntBASIC7.34□□□□□ -1.23
CLIP1P30622 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CLIP1P30622 AC004938.1-201ENST00000438468 308 ntBASIC7.34□□□□□ -1.23
CLIP1P30622 AC098799.3-201ENST00000506095 438 ntBASIC7.34□□□□□ -1.23
CLIP1P30622 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.34□□□□□ -1.23
CLIP1P30622 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.34□□□□□ -1.23
CLIP1P30622 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CLIP1P30622 AC069366.1-201ENST00000583159 838 ntBASIC7.34□□□□□ -1.23
CLIP1P30622 AL137918.1-201ENST00000624542 1922 ntBASIC7.34□□□□□ -1.23
CLIP1P30622 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
CLIP1P30622 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
CLIP1P30622 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CLIP1P30622 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC7.33□□□□□ -1.24
CLIP1P30622 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.33□□□□□ -1.24
CLIP1P30622 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CLIP1P30622 GVINP1-202ENST00000531871 7271 ntBASIC7.33□□□□□ -1.24
CLIP1P30622 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CLIP1P30622 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLIP1P30622 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CLIP1P30622 AL672167.1-204ENST00000641875 3017 ntBASIC7.33□□□□□ -1.24
CLIP1P30622 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.33□□□□□ -1.24
CLIP1P30622 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CLIP1P30622 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLIP1P30622 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC7.33□□□□□ -1.24
CLIP1P30622 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLIP1P30622 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.33□□□□□ -1.24
CLIP1P30622 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.33□□□□□ -1.24
CLIP1P30622 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLIP1P30622 RNA5SP249-201ENST00000516127 99 ntBASIC7.33□□□□□ -1.24
CLIP1P30622 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.33□□□□□ -1.24
CLIP1P30622 AC009120.7-201ENST00000623452 780 ntBASIC7.33□□□□□ -1.24
CLIP1P30622 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.33□□□□□ -1.24
CLIP1P30622 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.33□□□□□ -1.24
CLIP1P30622 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CLIP1P30622 TET1P1-201ENST00000426627 2301 ntBASIC7.33□□□□□ -1.24
CLIP1P30622 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CLIP1P30622 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP1P30622 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP1P30622 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP1P30622 AL391684.1-202ENST00000641293 1636 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP1P30622 AL022393.1-201ENST00000625142 1677 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 OR4K17-201ENST00000315543 1032 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 AL358178.1-201ENST00000407698 397 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 NPM1P33-201ENST00000438918 872 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP1P30622 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.32□□□□□ -1.24
CLIP1P30622 ISCUP1-201ENST00000454451 448 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.32□□□□□ -1.24
CLIP1P30622 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP1P30622 AC010503.3-201ENST00000594355 540 ntBASIC7.32□□□□□ -1.24
CLIP1P30622 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP1P30622 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP1P30622 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CLIP1P30622 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP1P30622 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms