Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN3P26045 AC007382.1-201ENST00000624376 2618 ntBASIC5.13□□□□□ -1.59
PTPN3P26045 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN3P26045 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN3P26045 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PTPN3P26045 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.13□□□□□ -1.59
PTPN3P26045 TCP11X1-202ENST00000622971 1372 ntBASIC5.13□□□□□ -1.59
PTPN3P26045 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PTPN3P26045 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.13□□□□□ -1.59
PTPN3P26045 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.13□□□□□ -1.59
PTPN3P26045 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTPN3P26045 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PTPN3P26045 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
PTPN3P26045 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 OR9K1P-202ENST00000641111 3217 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 SNURFL-201ENST00000309296 343 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AC017079.1-201ENST00000333650 415 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 OR6K3-202ENST00000368146 996 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 RNU6-31P-201ENST00000384388 108 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 SNORA70.10-201ENST00000384515 134 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 RN7SKP273-201ENST00000411392 314 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.12□□□□□ -1.59
PTPN3P26045 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN3P26045 AL355433.1-201ENST00000422804 300 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 OR5M12P-201ENST00000423388 929 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 MTND2P21-201ENST00000436242 1042 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 MTND2P25-201ENST00000449028 610 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 AL356981.1-201ENST00000454879 684 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 RWDD4P1-201ENST00000488019 565 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN3P26045 RN7SKP260-201ENST00000516907 149 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN3P26045 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 MTND4LP25-201ENST00000570218 163 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 OR4H6P-202ENST00000603819 340 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AL627230.1-201ENST00000613077 211 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AL591926.8-201ENST00000616876 211 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.12□□□□□ -1.59
PTPN3P26045 CIR1P2-201ENST00000514821 1342 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AP000542.2-201ENST00000623199 6179 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.12□□□□□ -1.59
PTPN3P26045 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 AL590763.1-201ENST00000398297 1545 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 AC068446.1-201ENST00000556425 1549 ntBASIC5.12□□□□□ -1.59
PTPN3P26045 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
PTPN3P26045 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTPN3P26045 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN3P26045 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PTPN3P26045 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN3P26045 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN3P26045 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN3P26045 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PTPN3P26045 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN3P26045 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN3P26045 RPL23P2-201ENST00000320371 421 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN3P26045 SNORA66-201ENST00000384792 133 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN3P26045 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.11□□□□□ -1.59
PTPN3P26045 AC073464.3-201ENST00000422564 712 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN3P26045 AC012497.1-201ENST00000429392 575 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN3P26045 RHOT1P3-201ENST00000436571 331 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 AC074367.1-201ENST00000438685 1125 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN3P26045 AC023512.1-201ENST00000444513 499 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN3P26045 CASP3P1-201ENST00000446037 609 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 BTF3P6-201ENST00000448054 499 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 AC090114.3-201ENST00000479267 829 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 HMGN2P25-201ENST00000486956 268 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN3P26045 HMGB1P3-201ENST00000502802 616 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 RNA5SP92-201ENST00000516437 110 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.11□□□□□ -1.59
PTPN3P26045 RPL23AP53-201ENST00000521854 457 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN3P26045 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN3P26045 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN3P26045 AL137072.1-201ENST00000603444 466 ntBASIC5.11□□□□□ -1.59
PTPN3P26045 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN3P26045 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms