Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC079193.1-201ENST00000460497 588 ntBASIC7.4□□□□□ -1.22
RFX1P22670 RPS7P10-201ENST00000464254 603 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC083806.1-201ENST00000468934 316 ntBASIC7.4□□□□□ -1.22
RFX1P22670 UBA52P3-201ENST00000491303 382 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC063943.2-201ENST00000495697 534 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC108941.1-201ENST00000502853 530 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC114324.2-202ENST00000503812 134 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX1P22670 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 AC074344.1-201ENST00000512823 224 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AP002748.2-201ENST00000528671 348 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 ADI1P3-201ENST00000549509 470 ntBASIC7.4□□□□□ -1.22
RFX1P22670 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.4□□□□□ -1.22
RFX1P22670 MIR3154-201ENST00000577829 84 ntBASIC7.4□□□□□ -1.22
RFX1P22670 MIR4732-201ENST00000581873 76 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX1P22670 AC131902.3-201ENST00000611767 581 ntBASIC7.4□□□□□ -1.22
RFX1P22670 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.4□□□□□ -1.22
RFX1P22670 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.4□□□□□ -1.22
RFX1P22670 MIR6849-201ENST00000618543 69 ntBASIC7.4□□□□□ -1.22
RFX1P22670 MRPL57P3-201ENST00000619218 176 ntBASIC7.4□□□□□ -1.22
RFX1P22670 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.4□□□□□ -1.22
RFX1P22670 AC093591.3-201ENST00000634516 308 ntBASIC7.4□□□□□ -1.22
RFX1P22670 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RFX1P22670 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RFX1P22670 AC009948.3-201ENST00000603415 1798 ntBASIC7.4□□□□□ -1.23
RFX1P22670 AC105114.1-201ENST00000624795 1862 ntBASIC7.4□□□□□ -1.23
RFX1P22670 Z97989.1-201ENST00000531702 2421 ntBASIC7.4□□□□□ -1.23
RFX1P22670 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.4□□□□□ -1.23
RFX1P22670 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RFX1P22670 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFX1P22670 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFX1P22670 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
RFX1P22670 AL117339.4-201ENST00000608335 7063 ntBASIC7.39□□□□□ -1.23
RFX1P22670 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX1P22670 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 CYP2G2P-201ENST00000594920 1485 ntBASIC7.39□□□□□ -1.23
RFX1P22670 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX1P22670 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RFX1P22670 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RFX1P22670 SNORD115-47-201ENST00000391226 86 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 NPM1P4-201ENST00000414095 812 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 RPL18AP14-201ENST00000417685 526 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AL139184.1-202ENST00000422303 222 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 AC018804.1-201ENST00000430381 618 ntBASIC7.39□□□□□ -1.23
RFX1P22670 MTCO3P18-201ENST00000440206 761 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 AL022238.1-201ENST00000442557 355 ntBASIC7.39□□□□□ -1.23
RFX1P22670 MTATP6P30-201ENST00000443540 664 ntBASIC7.39□□□□□ -1.23
RFX1P22670 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 MED28P7-201ENST00000456611 530 ntBASIC7.39□□□□□ -1.23
RFX1P22670 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX1P22670 RN7SL170P-201ENST00000487098 295 ntBASIC7.39□□□□□ -1.23
RFX1P22670 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.39□□□□□ -1.23
RFX1P22670 AC006499.2-201ENST00000513470 337 ntBASIC7.39□□□□□ -1.23
RFX1P22670 MTND5P4-201ENST00000514978 288 ntBASIC7.39□□□□□ -1.23
RFX1P22670 RNA5SP278-201ENST00000517055 102 ntBASIC7.39□□□□□ -1.23
RFX1P22670 IGLC4-201ENST00000517690 248 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.39□□□□□ -1.23
RFX1P22670 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX1P22670 AC011447.2-201ENST00000592921 283 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC020914.7-201ENST00000594477 545 ntBASIC7.39□□□□□ -1.23
RFX1P22670 BNIP3P8-201ENST00000597863 560 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC004908.1-201ENST00000606572 541 ntBASIC7.39□□□□□ -1.23
RFX1P22670 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 AC103710.1-201ENST00000610003 901 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC092794.2-201ENST00000620933 563 ntBASIC7.39□□□□□ -1.23
RFX1P22670 MIR6806-201ENST00000622141 64 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC022140.2-201ENST00000623500 188 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AP000577.1-201ENST00000624366 878 ntBASIC7.39□□□□□ -1.23
RFX1P22670 AC099654.14-201ENST00000638599 341 ntBASIC7.39□□□□□ -1.23
RFX1P22670 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.39□□□□□ -1.23
RFX1P22670 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RFX1P22670 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.39□□□□□ -1.23
RFX1P22670 AC093278.2-201ENST00000564956 2485 ntBASIC7.39□□□□□ -1.23
RFX1P22670 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFX1P22670 MAPK10-365ENST00000641902 3825 ntBASIC7.39□□□□□ -1.23
RFX1P22670 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms