| PTPN2 | P17706 | AL359715.3-201 | ENST00000569267 | 2123 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | LINC02186-201 | ENST00000575767 | 885 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC015845.2-201 | ENST00000581805 | 472 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC024592.1-202 | ENST00000590441 | 341 nt | TSL 3 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | ZNF836-203 | ENST00000597065 | 808 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MTATP6P2-201 | ENST00000603319 | 678 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC019131.2-201 | ENST00000609071 | 870 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC244107.2-201 | ENST00000611773 | 76 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | PLSCR2-207 | ENST00000613069 | 1208 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC095038.2-201 | ENST00000621464 | 1070 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | PRKCQ-AS1-218 | ENST00000624974 | 1132 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | CASC15-208 | ENST00000636388 | 1174 nt | TSL 5 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | TNFAIP8-207 | ENST00000513374 | 1385 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | EDIL3-202 | ENST00000380138 | 4244 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | LIPF-203 | ENST00000394375 | 1470 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SOCS5P3-201 | ENST00000425115 | 1576 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | NPSR1-AS1-202 | ENST00000419766 | 4821 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | NR2C2-213 | ENST00000617312 | 8113 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RALGAPA1P1-201 | ENST00000443361 | 6232 nt | BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | DNTTIP2-202 | ENST00000436063 | 5897 nt | APPRIS P1 TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | USP28-213 | ENST00000544967 | 3498 nt | TSL 1 (best) BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | ETV1-208 | ENST00000420159 | 6231 nt | TSL 2 BASIC | 5.49 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | DST-205 | ENST00000370765 | 8999 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | ZNF615-213 | ENST00000602063 | 4094 nt | APPRIS P3 TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | LMNTD1-201 | ENST00000282881 | 1718 nt | APPRIS P3 TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MTO1-212 | ENST00000498286 | 10857 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SLC1A3-201 | ENST00000265113 | 4170 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | GOLPH3L-201 | ENST00000271732 | 2999 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | IL7R-201 | ENST00000303115 | 4626 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | CASC19-221 | ENST00000641309 | 1382 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SYNCRIP-204 | ENST00000616122 | 6764 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RNU6-792P-201 | ENST00000363490 | 107 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RNA5SP455-201 | ENST00000365190 | 119 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MIR620-201 | ENST00000385232 | 95 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RRM2B-203 | ENST00000395912 | 900 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | KCNJ13-203 | ENST00000410029 | 1177 nt | APPRIS P1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MTCYBP7-201 | ENST00000419540 | 1134 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | ERMN-209 | ENST00000420719 | 1246 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | DDX39BP1-205 | ENST00000422507 | 192 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AL357315.1-201 | ENST00000422930 | 254 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | EI24P4-201 | ENST00000423683 | 1078 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC026320.1-202 | ENST00000444729 | 672 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | TRY2P-201 | ENST00000448860 | 689 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | TPPP2-202 | ENST00000460647 | 568 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC108161.1-201 | ENST00000461060 | 402 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MORC1-AS1-201 | ENST00000480826 | 564 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RPL7AP10-201 | ENST00000481016 | 791 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | HMGN2P25-201 | ENST00000486956 | 268 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | LNCPRESS2-201 | ENST00000502518 | 616 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC008592.2-201 | ENST00000506070 | 571 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RNA5SP228-201 | ENST00000516232 | 133 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | THUMPD3-AS1-210 | ENST00000519043 | 1115 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC103853.1-201 | ENST00000520588 | 649 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC009884.1-201 | ENST00000522670 | 545 nt | TSL 4 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC068768.1-204 | ENST00000544890 | 796 nt | TSL 4 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | ETFRF1-211 | ENST00000557540 | 1259 nt | APPRIS ALT1 TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC091117.1-201 | ENST00000560967 | 426 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | NQO1-206 | ENST00000564043 | 892 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC106729.1-201 | ENST00000567777 | 466 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC008537.2-201 | ENST00000596135 | 482 nt | TSL 3 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AP003117.1-201 | ENST00000602771 | 554 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC138035.1-202 | ENST00000604669 | 683 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC015849.2-201 | ENST00000605738 | 409 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | C8orf59-210 | ENST00000614462 | 734 nt | TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | UBE2NL-201 | ENST00000618570 | 1185 nt | APPRIS P1 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | OSER1-AS1-205 | ENST00000623343 | 827 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC092813.1-201 | ENST00000635455 | 969 nt | TSL 5 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SYTL2-204 | ENST00000389958 | 1943 nt | TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RPGRIP1L-212 | ENST00000621565 | 6038 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MTERF1-202 | ENST00000406735 | 1639 nt | APPRIS ALT2 TSL 2 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | OR1E1-201 | ENST00000322608 | 1307 nt | APPRIS P1 BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MTND4P9-201 | ENST00000507819 | 1346 nt | BASIC | 5.48 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SCARNA15-201 | ENST00000607520 | 4325 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | DAZ1-206 | ENST00000620725 | 1891 nt | TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | LIX1-AS1-201 | ENST00000504578 | 1793 nt | TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RNF213-204 | ENST00000508628 | 17730 nt | APPRIS ALT2 TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SELL-201 | ENST00000236147 | 2436 nt | APPRIS P1 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | SLC12A6-216 | ENST00000560164 | 3744 nt | TSL 2 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | MIR4500HG-201 | ENST00000436290 | 1675 nt | TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | WDR63-201 | ENST00000294664 | 2995 nt | APPRIS P3 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | PDE4B-201 | ENST00000329654 | 3998 nt | TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | GPR18-202 | ENST00000397470 | 1468 nt | APPRIS P1 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | NXF4-202 | ENST00000416098 | 1465 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | EEF1A1P36-201 | ENST00000427807 | 1351 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | OR10AG1-201 | ENST00000312345 | 1016 nt | APPRIS P1 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | OR11H6-201 | ENST00000315519 | 993 nt | APPRIS P1 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | TRAV10-201 | ENST00000390432 | 379 nt | APPRIS P1 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | TAS2R31-201 | ENST00000390675 | 1021 nt | APPRIS P1 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | DEFB113-201 | ENST00000398718 | 249 nt | APPRIS P1 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | CXCL8-202 | ENST00000401931 | 700 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | ATP5F1P6-201 | ENST00000402768 | 767 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | RN7SKP97-201 | ENST00000410966 | 333 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AL390036.1-201 | ENST00000419428 | 734 nt | TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC092570.3-201 | ENST00000420113 | 693 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AL158166.2-201 | ENST00000420845 | 748 nt | TSL 2 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC092637.1-201 | ENST00000444745 | 510 nt | TSL 5 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC096644.1-201 | ENST00000446169 | 390 nt | TSL 3 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | TRBV2-201 | ENST00000455382 | 421 nt | APPRIS P1 BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AL133244.1-201 | ENST00000456007 | 258 nt | BASIC | 5.47 | □□□□□ -1.53 | | |
| PTPN2 | P17706 | AC092324.1-201 | ENST00000468671 | 324 nt | BASIC | 5.47 | □□□□□ -1.53 | | |