Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.22□□□□□ -1.57
COL11A1P12107 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL11A1P12107 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL11A1P12107 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.22□□□□□ -1.57
COL11A1P12107 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL11A1P12107 ASNSP1-204ENST00000641977 1664 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AL592182.3-201ENST00000642132 3304 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL11A1P12107 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 TCEA1P3-201ENST00000443005 880 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AL359073.1-201ENST00000448036 403 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.22□□□□□ -1.57
COL11A1P12107 AL162591.2-201ENST00000449634 317 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.22□□□□□ -1.57
COL11A1P12107 AC106806.2-201ENST00000509365 500 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.22□□□□□ -1.57
COL11A1P12107 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.22□□□□□ -1.57
COL11A1P12107 AL354984.3-201ENST00000604803 325 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 AC020634.1-201ENST00000608701 549 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL11A1P12107 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.22□□□□□ -1.57
COL11A1P12107 AP000432.2-201ENST00000624164 2048 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 BCORP1-203ENST00000513194 5093 ntBASIC5.22□□□□□ -1.57
COL11A1P12107 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
COL11A1P12107 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
COL11A1P12107 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.21□□□□□ -1.58
COL11A1P12107 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
COL11A1P12107 CPHL1P-201ENST00000461341 3407 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL11A1P12107 RPL21P43-201ENST00000425440 472 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.21□□□□□ -1.58
COL11A1P12107 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.21□□□□□ -1.58
COL11A1P12107 ISCUP1-201ENST00000454451 448 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.21□□□□□ -1.58
COL11A1P12107 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.21□□□□□ -1.58
COL11A1P12107 AC090515.3-201ENST00000560431 315 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.21□□□□□ -1.58
COL11A1P12107 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL11A1P12107 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL11A1P12107 ZNF402P-201ENST00000404435 3100 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 DDX18P5-201ENST00000534547 1306 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.21□□□□□ -1.58
COL11A1P12107 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL11A1P12107 AL158163.1-201ENST00000603915 1649 ntBASIC5.21□□□□□ -1.58
COL11A1P12107 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.21□□□□□ -1.58
COL11A1P12107 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL11A1P12107 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL11A1P12107 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL11A1P12107 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
COL11A1P12107 AC017079.1-201ENST00000333650 415 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AL022722.2-201ENST00000402519 180 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.2□□□□□ -1.58
COL11A1P12107 RPL35AP21-201ENST00000437667 333 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 BTF3P6-201ENST00000448054 499 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 DHFRP3-201ENST00000455595 559 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 AK4P6-201ENST00000505168 528 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AP000619.2-201ENST00000546014 969 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 MIR492-201ENST00000638676 116 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL11A1P12107 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL11A1P12107 RN7SKP227-201ENST00000364445 330 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 AL590762.2-201ENST00000395798 571 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.2□□□□□ -1.58
COL11A1P12107 RPL23AP52-201ENST00000439311 478 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 H2AFZP5-201ENST00000446960 382 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AC053481.1-201ENST00000467217 306 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AC010618.1-201ENST00000469924 477 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 AC090686.1-201ENST00000481577 749 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 RN7SL691P-201ENST00000494487 301 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 AC140479.6-201ENST00000633535 357 ntBASIC5.2□□□□□ -1.58
COL11A1P12107 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL11A1P12107 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL11A1P12107 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
COL11A1P12107 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL11A1P12107 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms