Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL1P09341 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CXCL1P09341 RNA5SP284-201ENST00000384547 118 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 MIR600-201ENST00000385007 98 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6-1320P-201ENST00000390838 107 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6-1269P-201ENST00000391139 107 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 ZNF603P-201ENST00000405613 487 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 IPMKP1-201ENST00000425988 855 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 ELOCP8-201ENST00000439309 332 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 ELOCP15-201ENST00000442090 332 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL1P09341 RBMY2TP-201ENST00000451162 947 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6-599P-201ENST00000459383 107 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6-1193P-201ENST00000459461 107 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC105918.1-201ENST00000474399 838 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RPS21P4-201ENST00000487122 248 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AC015864.1-201ENST00000496512 544 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AP002981.1-201ENST00000517692 975 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.63□□□□□ -1.83
CXCL1P09341 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC107016.1-201ENST00000550463 337 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 FKBP1BP1-201ENST00000553366 325 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL1P09341 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC124068.1-201ENST00000563131 678 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 SUGT1P3-202ENST00000604259 383 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AC100767.2-201ENST00000604840 693 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 AC233309.1-201ENST00000619522 751 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6-368P-201ENST00000620928 107 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 RNU6-538P-201ENST00000622329 107 ntBASIC3.63□□□□□ -1.83
CXCL1P09341 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL1P09341 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 AC027287.1-201ENST00000553115 1453 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CXCL1P09341 AL356489.2-201ENST00000566968 3528 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 RNA5SP22-201ENST00000365393 109 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL1P09341 RN7SKP114-201ENST00000410327 279 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL1P09341 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL1P09341 AC013470.3-201ENST00000420252 1194 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.62□□□□□ -1.83
CXCL1P09341 RPL7P57-201ENST00000423238 740 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AC108075.1-201ENST00000424692 529 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 RPSAP41-201ENST00000439695 860 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AC064862.4-201ENST00000442180 334 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 OR7E125P-201ENST00000443450 846 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL1P09341 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL1P09341 RPL23AP71-201ENST00000470966 469 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL1P09341 SYT14P1-201ENST00000481459 721 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 RN7SL170P-201ENST00000487098 295 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 RN7SL205P-201ENST00000490174 284 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL1P09341 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.62□□□□□ -1.83
CXCL1P09341 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.62□□□□□ -1.83
CXCL1P09341 RNA5SP497-201ENST00000516081 97 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 RN7SKP260-201ENST00000516907 149 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 IGHV3-63-201ENST00000518422 341 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL1P09341 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL1P09341 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL1P09341 AC107918.3-201ENST00000533272 382 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL1P09341 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms