Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC027216.1-201ENST00000577726 685 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC209154.1-201ENST00000582156 337 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.57□□□□□ -1.52
MMP3P08254 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
MMP3P08254 AC068790.7-201ENST00000602347 528 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC068790.4-201ENST00000602474 263 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC018645.2-201ENST00000609151 472 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.57□□□□□ -1.52
MMP3P08254 AC104763.3-201ENST00000613765 618 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC010872.1-201ENST00000624225 675 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.57□□□□□ -1.52
MMP3P08254 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.57□□□□□ -1.52
MMP3P08254 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
MMP3P08254 AC116158.1-201ENST00000560231 2129 ntBASIC5.57□□□□□ -1.52
MMP3P08254 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MMP3P08254 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.57□□□□□ -1.52
MMP3P08254 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.57□□□□□ -1.52
MMP3P08254 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.57□□□□□ -1.52
MMP3P08254 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
MMP3P08254 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
MMP3P08254 AL355834.1-201ENST00000556602 3965 ntBASIC5.57□□□□□ -1.52
MMP3P08254 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
MMP3P08254 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 AC026951.1-201ENST00000559530 2459 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.56□□□□□ -1.52
MMP3P08254 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
MMP3P08254 OR4K17-201ENST00000315543 1032 ntBASIC5.56□□□□□ -1.52
MMP3P08254 RNU1-32P-201ENST00000363937 159 ntBASIC5.56□□□□□ -1.52
MMP3P08254 SNORD115-48-201ENST00000364764 76 ntBASIC5.56□□□□□ -1.52
MMP3P08254 ST13P16-201ENST00000401760 781 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AL353692.2-201ENST00000407054 335 ntBASIC5.56□□□□□ -1.52
MMP3P08254 GSTA7P-201ENST00000438425 448 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AC007000.2-201ENST00000442564 487 ntBASIC5.56□□□□□ -1.52
MMP3P08254 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.56□□□□□ -1.52
MMP3P08254 OR1H1P-201ENST00000448731 937 ntBASIC5.56□□□□□ -1.52
MMP3P08254 SLC25A18P1-201ENST00000449385 454 ntBASIC5.56□□□□□ -1.52
MMP3P08254 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.56□□□□□ -1.52
MMP3P08254 ATP5G1P3-201ENST00000463301 410 ntBASIC5.56□□□□□ -1.52
MMP3P08254 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.56□□□□□ -1.52
MMP3P08254 AC011005.3-201ENST00000491624 395 ntBASIC5.56□□□□□ -1.52
MMP3P08254 RPL23AP73-201ENST00000492507 471 ntBASIC5.56□□□□□ -1.52
MMP3P08254 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.56□□□□□ -1.52
MMP3P08254 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.56□□□□□ -1.52
MMP3P08254 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.56□□□□□ -1.52
MMP3P08254 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 TVP23CP2-201ENST00000571473 623 ntBASIC5.56□□□□□ -1.52
MMP3P08254 RN7SL290P-201ENST00000578661 300 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.56□□□□□ -1.52
MMP3P08254 AC011453.2-201ENST00000603737 729 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AC135178.6-201ENST00000605314 398 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AL138960.1-201ENST00000613838 513 ntBASIC5.56□□□□□ -1.52
MMP3P08254 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.56□□□□□ -1.52
MMP3P08254 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.56□□□□□ -1.52
MMP3P08254 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
MMP3P08254 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
MMP3P08254 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
MMP3P08254 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
MMP3P08254 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP3P08254 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.55□□□□□ -1.52
MMP3P08254 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 RNA5SP241-201ENST00000391326 114 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC069282.1-201ENST00000411911 526 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP3P08254 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.55□□□□□ -1.52
MMP3P08254 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.55□□□□□ -1.52
MMP3P08254 Z99127.2-201ENST00000441426 334 ntBASIC5.55□□□□□ -1.52
MMP3P08254 MED28P3-201ENST00000444288 531 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.55□□□□□ -1.52
MMP3P08254 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 AC108751.3-201ENST00000461814 1020 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC078857.1-201ENST00000469870 667 ntBASIC5.55□□□□□ -1.52
MMP3P08254 NDUFA5P9-201ENST00000472609 340 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC005412.2-201ENST00000492004 341 ntBASIC5.55□□□□□ -1.52
MMP3P08254 AC093801.2-201ENST00000503966 1050 ntBASIC5.55□□□□□ -1.52
MMP3P08254 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
MMP3P08254 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
MMP3P08254 AC093815.1-201ENST00000508637 280 ntBASIC5.55□□□□□ -1.52
MMP3P08254 NPM1P21-201ENST00000513394 762 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms