Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AL645608.4-201ENST00000423619 154 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 FABP7P1-201ENST00000424004 391 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 CENPIP1-201ENST00000425713 902 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 UBE2V2P1-201ENST00000434717 398 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 CYCSP11-201ENST00000436426 315 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 TPT1P12-201ENST00000448968 492 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AC239798.3-201ENST00000454459 408 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AL672167.3-201ENST00000465951 960 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 OR52A4P-201ENST00000472867 958 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AK3P4-201ENST00000504283 583 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AP001960.1-201ENST00000506494 658 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 PRELID3BP5-201ENST00000508612 460 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AC016559.2-201ENST00000510759 359 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA1P02708 BUD31P1-201ENST00000521828 359 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA1P02708 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA1P02708 AL049839.1-201ENST00000556151 657 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AP000919.1-201ENST00000582850 985 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.33□□□□□ -1.56
CHRNA1P02708 QTRT1P1-201ENST00000604344 1078 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 AC243960.7-201ENST00000623532 707 ntBASIC5.33□□□□□ -1.56
CHRNA1P02708 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHRNA1P02708 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CHRNA1P02708 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.33□□□□□ -1.56
CHRNA1P02708 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CHRNA1P02708 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CHRNA1P02708 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CHRNA1P02708 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA1P02708 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA1P02708 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AC245100.2-201ENST00000454544 1679 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AC068538.1-201ENST00000376856 336 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CHRNA1P02708 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA1P02708 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA1P02708 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AC016831.4-201ENST00000438302 307 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 RPS27AP18-201ENST00000515536 459 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 AC026688.1-201ENST00000520639 1168 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AC084759.1-201ENST00000561168 290 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 MIR4284-201ENST00000578924 81 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA1P02708 MIR4715-201ENST00000584117 79 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 AC020915.5-201ENST00000596836 964 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 AP005212.4-201ENST00000614206 710 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AP001005.3-201ENST00000622049 129 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA1P02708 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHRNA1P02708 KARSP3-201ENST00000571212 1504 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CHRNA1P02708 AC008758.3-201ENST00000507003 1829 ntBASIC5.32□□□□□ -1.56
CHRNA1P02708 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA1P02708 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA1P02708 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA1P02708 SYT14P1-202ENST00000600441 1448 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA1P02708 BTBD10P1-201ENST00000549824 1352 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHRNA1P02708 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA1P02708 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA1P02708 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CHRNA1P02708 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.31□□□□□ -1.56
CHRNA1P02708 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA1P02708 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHRNA1P02708 U3.22-201ENST00000391120 215 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 VDAC2P1-201ENST00000399358 958 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 AC233289.1-201ENST00000403700 508 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA1P02708 HSPE1P16-201ENST00000426640 348 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 RPL23AP1-201ENST00000428990 471 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 CNOT7P1-201ENST00000429006 852 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA1P02708 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA1P02708 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.31□□□□□ -1.56
CHRNA1P02708 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA1P02708 AC026979.1-201ENST00000492525 396 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 AC104971.1-201ENST00000495117 578 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 AC073358.1-201ENST00000505671 684 ntBASIC5.31□□□□□ -1.56
CHRNA1P02708 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.31□□□□□ -1.56
CHRNA1P02708 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHRNA1P02708 AC133555.2-201ENST00000550213 292 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms