Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 Z95327.3-201ENST00000610385 572 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.51□□□□□ -1.53
COL2A1P02458 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.51□□□□□ -1.53
COL2A1P02458 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 AC120338.1-201ENST00000625074 1541 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.51□□□□□ -1.53
COL2A1P02458 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL2A1P02458 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.51□□□□□ -1.53
COL2A1P02458 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 AL122126.1-201ENST00000546905 1318 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 AC021146.4-201ENST00000309229 279 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 RNA5SP509-201ENST00000364577 119 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 SNORA70.4-201ENST00000365509 134 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 MIR659-201ENST00000384963 97 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 OR1F12-201ENST00000402365 945 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 TMBIM7P-201ENST00000418074 855 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.51□□□□□ -1.53
COL2A1P02458 AC104333.2-201ENST00000422630 192 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 RGS17P1-201ENST00000423358 553 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.51□□□□□ -1.53
COL2A1P02458 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.51□□□□□ -1.53
COL2A1P02458 BTF3P6-201ENST00000448054 499 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 AC109635.6-201ENST00000525487 1113 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 FKBP1BP1-201ENST00000553366 325 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 AC023575.1-201ENST00000580510 358 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 AC002044.3-201ENST00000623314 541 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL2A1P02458 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
COL2A1P02458 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL2A1P02458 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL2A1P02458 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
COL2A1P02458 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.5□□□□□ -1.53
COL2A1P02458 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.5□□□□□ -1.53
COL2A1P02458 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.5□□□□□ -1.53
COL2A1P02458 SAMMSON-210ENST00000641260 1308 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.5□□□□□ -1.53
COL2A1P02458 OR4K17-201ENST00000315543 1032 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 RNU1-64P-201ENST00000365443 163 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 RNA5SP171-201ENST00000391071 115 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.5□□□□□ -1.53
COL2A1P02458 RPS27AP12-201ENST00000429552 465 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 NDUFA5P1-201ENST00000433858 341 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.5□□□□□ -1.53
COL2A1P02458 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.5□□□□□ -1.53
COL2A1P02458 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 RPL7P32-201ENST00000457119 744 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 MTND2P28-201ENST00000457540 1044 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 SNORA84-201ENST00000459229 133 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AC010618.1-201ENST00000469924 477 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.5□□□□□ -1.53
COL2A1P02458 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.5□□□□□ -1.53
COL2A1P02458 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL2A1P02458 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.5□□□□□ -1.53
COL2A1P02458 AC007224.1-201ENST00000564410 144 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.5□□□□□ -1.53
COL2A1P02458 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.5□□□□□ -1.53
COL2A1P02458 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.5□□□□□ -1.53
COL2A1P02458 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AL133243.1-201ENST00000614487 366 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AL121890.3-201ENST00000618494 516 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.5□□□□□ -1.53
COL2A1P02458 SALL4P2-201ENST00000423288 2910 ntBASIC5.5□□□□□ -1.53
COL2A1P02458 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL2A1P02458 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL2A1P02458 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.49□□□□□ -1.53
COL2A1P02458 Z98745.1-201ENST00000402553 494 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 AC009506.2-201ENST00000420635 840 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 GAPDHP49-201ENST00000421421 961 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.49□□□□□ -1.53
COL2A1P02458 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.49□□□□□ -1.53
COL2A1P02458 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.49□□□□□ -1.53
COL2A1P02458 AC011276.1-201ENST00000469688 323 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 CR383656.1-201ENST00000484916 377 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL2A1P02458 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.49□□□□□ -1.53
COL2A1P02458 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.49□□□□□ -1.53
COL2A1P02458 AP000827.1-201ENST00000527814 258 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 MED28P5-201ENST00000528254 438 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.49□□□□□ -1.53
COL2A1P02458 AC127024.5-201ENST00000580085 462 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.49□□□□□ -1.53
COL2A1P02458 AC005899.7-201ENST00000618199 588 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 AC109446.4-201ENST00000623235 2755 ntBASIC5.49□□□□□ -1.53
COL2A1P02458 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.49□□□□□ -1.53
COL2A1P02458 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.49□□□□□ -1.53
COL2A1P02458 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL2A1P02458 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL2A1P02458 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.49□□□□□ -1.53
COL2A1P02458 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL2A1P02458 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms