Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.09□□□□□ -1.76
HLA-DQB1P01920 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC067945.1-201ENST00000342609 618 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 MIR513A2-201ENST00000385249 127 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 RNU2-22P-201ENST00000411266 212 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 NFYAP1-201ENST00000431953 972 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 SPRYD7P1-201ENST00000443861 570 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 RPL7L1P1-201ENST00000448259 785 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC133473.1-201ENST00000455173 299 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 RPL7P39-201ENST00000481157 744 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 RN7SL97P-201ENST00000486780 299 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC139783.2-201ENST00000504847 1145 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 PGAM1P13-201ENST00000507497 754 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 HNRNPKP5-201ENST00000515300 253 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 IGHV3-63-201ENST00000518422 341 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 OR5M7P-201ENST00000526140 972 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 NMNAT1P1-201ENST00000554095 876 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL049839.1-201ENST00000556151 657 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 CYP4A43P-201ENST00000568156 121 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC020978.7-201ENST00000575953 1187 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC115989.2-201ENST00000578640 563 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 MIR3614-201ENST00000581261 86 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL031666.3-201ENST00000609320 1006 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL591926.8-201ENST00000616876 211 ntBASIC4.08□□□□□ -1.76
HLA-DQB1P01920 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQB1P01920 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AL355852.1-201ENST00000454081 1771 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 MAPK10-304ENST00000641341 3984 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 MIR143-201ENST00000385300 106 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 DDX39BP1-205ENST00000422507 192 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 OR52E7P-201ENST00000452394 933 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC023141.9-201ENST00000458734 412 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 RPSAP39-201ENST00000467439 883 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC097484.1-201ENST00000471148 389 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 RN7SL717P-201ENST00000478343 297 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC108693.1-201ENST00000496068 432 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 MTATP6P1-201ENST00000514057 681 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 RN7SKP260-201ENST00000516907 149 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 KCTD9P6-201ENST00000522306 950 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC015660.5-201ENST00000623238 564 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 AC099494.2-201ENST00000623371 978 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 CASC19-264ENST00000641912 1184 ntBASIC4.07□□□□□ -1.76
HLA-DQB1P01920 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB1P01920 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms