Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DQA1P01909 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 OR10J6P-201ENST00000289731 930 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 RNU6-670P-201ENST00000364312 104 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SNORA70-201ENST00000384436 135 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SNORA17A-201ENST00000391185 133 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL031985.1-201ENST00000392713 418 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL607077.1-201ENST00000401718 499 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL080315.1-201ENST00000406055 466 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 GSTM3P2-201ENST00000412746 530 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 TRIM60P17-201ENST00000415181 719 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 RFESDP1-201ENST00000422350 461 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 ATP5G1P3-201ENST00000463301 410 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 OR51K1P-201ENST00000510214 950 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 MTATP6P1-201ENST00000514057 681 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC078878.1-201ENST00000539832 958 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC090888.3-201ENST00000558917 509 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SNORD39.2-201ENST00000579995 76 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 OR1AB1P-201ENST00000585564 761 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC008759.1-201ENST00000589783 983 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC008638.3-201ENST00000603341 463 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 IMMP1LP3-201ENST00000604197 224 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC004477.3-201ENST00000614061 590 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SNORA17.5-201ENST00000630429 132 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC135068.12-201ENST00000637370 931 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL445487.1-201ENST00000415694 1580 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AL606537.1-201ENST00000607258 2011 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.66□□□□□ -1.82
HLA-DQA1P01909 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DQA1P01909 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DQA1P01909 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HLA-DQA1P01909 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.65□□□□□ -1.82
HLA-DQA1P01909 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DQA1P01909 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.65□□□□□ -1.82
HLA-DQA1P01909 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 RNA5SP132-201ENST00000364725 118 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 SNORA68.2-201ENST00000391263 128 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 DHFRP5-201ENST00000406944 564 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 RAD1P2-201ENST00000446414 663 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AL121877.1-201ENST00000453704 622 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 SETP20-201ENST00000457046 852 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 PPIAP19-201ENST00000486414 492 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 OR52A4P-203ENST00000498233 1014 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DQA1P01909 NRBF2P4-201ENST00000520874 850 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC018442.3-201ENST00000523025 183 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 AC107918.3-201ENST00000533272 382 ntBASIC3.65□□□□□ -1.83
HLA-DQA1P01909 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms