Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LMX1BO60663 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.65□□□□□ -1.66
LMX1BO60663 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.65□□□□□ -1.66
LMX1BO60663 AC131971.1-201ENST00000332881 1482 ntBASIC4.65□□□□□ -1.66
LMX1BO60663 TCP1P3-201ENST00000414406 1498 ntBASIC4.65□□□□□ -1.66
LMX1BO60663 AC103591.2-201ENST00000265259 766 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 MIR550A3-201ENST00000390735 95 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 AL133325.1-201ENST00000421090 382 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMX1BO60663 FO393414.1-201ENST00000428697 1184 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 EXOSC3P1-201ENST00000448649 500 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LMX1BO60663 FAR2P1-206ENST00000449736 709 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 PRPF38AP1-201ENST00000451976 933 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 AC245028.2-201ENST00000458673 253 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 CBX1P5-201ENST00000475330 559 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 RPS12P31-201ENST00000491419 398 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 OR9N1P-202ENST00000494289 481 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 RN7SL808P-201ENST00000496066 299 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 RPS26P24-201ENST00000497656 331 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 NIFKP7-201ENST00000503365 834 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 NDUFB5P1-201ENST00000508134 564 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AC016559.2-201ENST00000510759 359 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 HMGB1P47-201ENST00000511281 589 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 NPM1P21-201ENST00000513394 762 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 RNA5SP230-201ENST00000517039 122 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AP001207.2-201ENST00000519490 539 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 NOP56P3-201ENST00000549457 385 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMX1BO60663 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 NMNAT1P5-201ENST00000559657 841 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.65□□□□□ -1.67
LMX1BO60663 AP002884.5-201ENST00000595053 1132 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 RPP40P2-201ENST00000603596 712 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AC009027.1-201ENST00000604510 479 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AC124016.2-201ENST00000610058 665 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 AL356752.1-201ENST00000615844 593 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMX1BO60663 AP000676.4-201ENST00000624659 623 ntBASIC4.65□□□□□ -1.67
LMX1BO60663 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LMX1BO60663 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LMX1BO60663 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.65□□□□□ -1.67
LMX1BO60663 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LMX1BO60663 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMX1BO60663 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.65□□□□□ -1.67
LMX1BO60663 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 AC116158.1-201ENST00000560231 2129 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LMX1BO60663 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 AC020633.1-201ENST00000468439 2247 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 AC017002.4-201ENST00000604721 1525 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LMX1BO60663 OR9G4-201ENST00000302957 984 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LMX1BO60663 RNA5SP183-201ENST00000362452 119 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 MIR765-201ENST00000390226 114 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 ST13P16-201ENST00000401760 781 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC096533.1-201ENST00000411645 353 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 RANP4-201ENST00000413361 655 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.64□□□□□ -1.67
LMX1BO60663 AL139128.1-201ENST00000413921 941 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 BX664727.1-201ENST00000416024 466 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 MGAT2P2-201ENST00000427194 797 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.64□□□□□ -1.67
LMX1BO60663 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.64□□□□□ -1.67
LMX1BO60663 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 AC016772.1-201ENST00000444170 1261 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 EIF2S2P2-201ENST00000447161 982 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 NOP56P2-201ENST00000447491 769 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC091685.2-201ENST00000454924 864 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC105918.1-201ENST00000474399 838 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC022336.1-201ENST00000475510 337 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 RPS18P6-201ENST00000476880 458 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms