Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AC009784.1-201ENST00000426484 460 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 BX276092.6-201ENST00000430476 250 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.8□□□□□ -1.64
ZIC3O60481 ELOCP11-201ENST00000436690 332 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 ELOCP16-201ENST00000444494 332 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 EIF2S2P2-201ENST00000447161 982 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 NPM1P19-201ENST00000450070 712 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 BX276092.8-201ENST00000455722 250 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 GTF2IP12-201ENST00000456547 356 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AL139824.2-201ENST00000458731 1095 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC110749.1-201ENST00000462007 357 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 RN7SL799P-201ENST00000475891 298 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC020699.1-201ENST00000505161 445 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.8□□□□□ -1.64
ZIC3O60481 HIGD1AP14-201ENST00000507617 282 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AC097486.1-201ENST00000515331 210 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.8□□□□□ -1.64
ZIC3O60481 RNU6-1004P-201ENST00000516584 111 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.8□□□□□ -1.64
ZIC3O60481 IGLV2-28-201ENST00000520681 304 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 AL357094.1-201ENST00000603845 844 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 RNU4-5P-201ENST00000607255 135 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC126915.2-201ENST00000610957 190 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC007786.3-201ENST00000615154 596 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC090527.3-201ENST00000619041 548 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC006963.1-201ENST00000624003 1052 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC011815.3-201ENST00000624194 473 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC024023.1-201ENST00000624530 922 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 MTCO1P7-201ENST00000419523 1542 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 AL121950.1-201ENST00000624993 2077 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ZIC3O60481 NXF4-202ENST00000416098 1465 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
ZIC3O60481 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZIC3O60481 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 ABCC13-202ENST00000463099 3842 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.79□□□□□ -1.64
ZIC3O60481 CASC19-260ENST00000641828 2001 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.79□□□□□ -1.64
ZIC3O60481 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ZIC3O60481 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ZIC3O60481 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ZIC3O60481 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 MIR105-1-201ENST00000385222 81 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AL603865.2-201ENST00000401679 213 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 RPS27AP11-201ENST00000402798 447 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 HMGB1P13-201ENST00000406019 642 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 DUTP5-201ENST00000406790 469 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 HMGB3P31-201ENST00000413333 595 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 MTATP6P20-201ENST00000414147 562 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZIC3O60481 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 NANOGP5-201ENST00000424456 877 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC092447.3-201ENST00000426027 686 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 FO393419.3-201ENST00000428741 282 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.79□□□□□ -1.64
ZIC3O60481 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 ELOCP13-201ENST00000443934 329 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC097499.1-201ENST00000444277 208 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 MTND1P33-201ENST00000446251 917 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.79□□□□□ -1.64
ZIC3O60481 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 AC079168.1-201ENST00000458741 345 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC026348.1-201ENST00000462549 1053 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.79□□□□□ -1.64
ZIC3O60481 RN7SL222P-201ENST00000476452 299 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AC008953.1-201ENST00000497334 318 ntBASIC4.79□□□□□ -1.64
ZIC3O60481 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.79□□□□□ -1.64
ZIC3O60481 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.79□□□□□ -1.64
ZIC3O60481 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms