Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CUX2O14529 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CUX2O14529 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CUX2O14529 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CUX2O14529 MIR200C-201ENST00000384980 68 ntBASIC8.18□□□□□ -1.1
CUX2O14529 SCP2-206ENST00000430330 938 ntTSL 2 BASIC8.18□□□□□ -1.1
CUX2O14529 AL445584.1-201ENST00000431451 330 ntBASIC8.18□□□□□ -1.1
CUX2O14529 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.18□□□□□ -1.1
CUX2O14529 AC138761.5-201ENST00000433967 325 ntBASIC8.18□□□□□ -1.1
CUX2O14529 AC097523.2-201ENST00000435551 652 ntBASIC8.18□□□□□ -1.1
CUX2O14529 BX842559.2-201ENST00000451418 605 ntBASIC8.18□□□□□ -1.1
CUX2O14529 AL691482.1-201ENST00000453255 87 ntBASIC8.18□□□□□ -1.1
CUX2O14529 EIF2S2P5-201ENST00000457635 968 ntBASIC8.18□□□□□ -1.1
CUX2O14529 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.18□□□□□ -1.1
CUX2O14529 NPM1P41-201ENST00000512920 831 ntBASIC8.18□□□□□ -1.1
CUX2O14529 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC8.18□□□□□ -1.1
CUX2O14529 AC068993.1-201ENST00000546724 589 ntBASIC8.18□□□□□ -1.1
CUX2O14529 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CUX2O14529 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.18□□□□□ -1.1
CUX2O14529 SRGNP1-201ENST00000603392 451 ntBASIC8.18□□□□□ -1.1
CUX2O14529 SNORA51-201ENST00000606420 132 ntBASIC8.18□□□□□ -1.1
CUX2O14529 AC010424.2-201ENST00000607594 443 ntBASIC8.18□□□□□ -1.1
CUX2O14529 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.18□□□□□ -1.1
CUX2O14529 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CUX2O14529 AC233968.1-201ENST00000611212 1300 ntBASIC8.18□□□□□ -1.1
CUX2O14529 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CUX2O14529 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CUX2O14529 OR14L1P-202ENST00000641545 3009 ntBASIC8.18□□□□□ -1.1
CUX2O14529 AC020656.2-201ENST00000613291 5309 ntBASIC8.18□□□□□ -1.1
CUX2O14529 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.17□□□□□ -1.1
CUX2O14529 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CUX2O14529 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 MIR383-201ENST00000362257 73 ntBASIC8.17□□□□□ -1.1
CUX2O14529 RNA5SP453-201ENST00000362503 119 ntBASIC8.17□□□□□ -1.1
CUX2O14529 LRRC37BP1-201ENST00000398851 714 ntBASIC8.17□□□□□ -1.1
CUX2O14529 AL357515.1-201ENST00000402967 542 ntBASIC8.17□□□□□ -1.1
CUX2O14529 AL356095.1-201ENST00000417217 199 ntBASIC8.17□□□□□ -1.1
CUX2O14529 AL117339.2-201ENST00000430475 180 ntBASIC8.17□□□□□ -1.1
CUX2O14529 AL359265.1-201ENST00000440296 795 ntBASIC8.17□□□□□ -1.1
CUX2O14529 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.17□□□□□ -1.1
CUX2O14529 RPL21P126-201ENST00000470049 478 ntBASIC8.17□□□□□ -1.1
CUX2O14529 TPT1P3-201ENST00000492841 512 ntBASIC8.17□□□□□ -1.1
CUX2O14529 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC8.17□□□□□ -1.1
CUX2O14529 AC108475.1-201ENST00000507880 950 ntBASIC8.17□□□□□ -1.1
CUX2O14529 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC8.17□□□□□ -1.1
CUX2O14529 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CUX2O14529 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.17□□□□□ -1.1
CUX2O14529 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CUX2O14529 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CUX2O14529 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CUX2O14529 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 AC006326.1-201ENST00000445465 787 ntBASIC8.16□□□□□ -1.1
CUX2O14529 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC8.16□□□□□ -1.1
CUX2O14529 MIR5699-201ENST00000578903 90 ntBASIC8.16□□□□□ -1.1
CUX2O14529 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 OR2BH1P-201ENST00000608850 864 ntBASIC8.16□□□□□ -1.1
CUX2O14529 AC007342.8-201ENST00000623278 678 ntBASIC8.16□□□□□ -1.1
CUX2O14529 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
CUX2O14529 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC8.16□□□□□ -1.1
CUX2O14529 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC8.16□□□□□ -1.1
CUX2O14529 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUX2O14529 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC8.15□□□□□ -1.1
CUX2O14529 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.15□□□□□ -1.1
CUX2O14529 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUX2O14529 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.15□□□□□ -1.1
CUX2O14529 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.15□□□□□ -1.1
CUX2O14529 Z92545.1-201ENST00000411782 234 ntBASIC8.15□□□□□ -1.1
CUX2O14529 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC8.15□□□□□ -1.1
CUX2O14529 AC140479.3-201ENST00000418944 1126 ntBASIC8.15□□□□□ -1.1
CUX2O14529 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.15□□□□□ -1.1
CUX2O14529 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.15□□□□□ -1.1
CUX2O14529 RN7SKP157-201ENST00000516174 282 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms