Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 FAM27B-201ENST00000610601 213 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 IRF5P1-201ENST00000504852 2164 ntBASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM49D1C9J1S8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC017104.4-201ENST00000636283 1592 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 OR51C1P-202ENST00000641159 1444 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 RNU1-106P-201ENST00000384382 164 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AL035696.2-201ENST00000407941 709 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 RPL21P91-201ENST00000429231 479 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC110749.1-201ENST00000462007 357 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC090142.1-201ENST00000465776 462 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 RPL23AP65-201ENST00000475608 468 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC108022.1-201ENST00000493466 478 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 RPL37AP8-201ENST00000494116 276 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AK4P6-201ENST00000505168 528 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC022832.1-201ENST00000530718 645 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 AC008966.2-201ENST00000606157 453 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 OR7A19P-201ENST00000608051 733 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 ZFRP1-201ENST00000457579 2970 ntBASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM49D1C9J1S8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 AL442639.1-201ENST00000625030 1899 ntBASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 NCLP2-201ENST00000416078 1462 ntBASIC4.65□□□□□ -1.66
TRIM49D1C9J1S8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 SNORA74A-201ENST00000364089 198 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 RNU6-171P-201ENST00000384354 107 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 MIR1178-201ENST00000408396 91 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 RN7SKP167-201ENST00000411047 285 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 RPL12P43-201ENST00000420608 499 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 RN7SKP147-201ENST00000517154 244 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 OR10D4P-201ENST00000525892 951 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 TRAV11-201ENST00000539512 339 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 AC091178.1-203ENST00000584586 279 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 RPL7P50-201ENST00000600588 727 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 EIF3FP1-201ENST00000613970 806 ntBASIC4.65□□□□□ -1.67
TRIM49D1C9J1S8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms