Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RNU1-149P-201ENST00000390870 161 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 SNORA77-201ENST00000408716 125 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MIR1282-201ENST00000408865 101 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RNU6-603P-201ENST00000411403 107 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC073136.2-201ENST00000417282 849 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RPL34P3-201ENST00000421454 338 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RPS4XP16-201ENST00000427198 791 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MTCO3P21-201ENST00000430791 643 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RPS20P1-201ENST00000434853 354 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RPL12P46-201ENST00000436610 195 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 VN1R48P-201ENST00000448149 1036 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 HMGB1P4-201ENST00000455362 567 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC005008.1-201ENST00000456151 612 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RN7SL517P-201ENST00000462240 305 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 NDUFA5P5-201ENST00000468361 342 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC022795.1-201ENST00000473808 480 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 METTL15P1-201ENST00000481421 1045 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RNA5SP271-201ENST00000516700 88 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MTCYBP19-201ENST00000517463 1124 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC012339.2-201ENST00000523996 453 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 TRIM77BP-201ENST00000524985 1119 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 GSTP1P1-201ENST00000548078 319 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC009303.3-201ENST00000591103 736 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC090948.2-201ENST00000607363 564 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MIR6861-201ENST00000618657 64 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC005086.4-201ENST00000623065 213 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 AC074101.1-201ENST00000637861 241 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 MAPK10-286ENST00000641208 8747 ntBASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RCL1Q9Y2P8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
RCL1Q9Y2P8 MAPK10-304ENST00000641341 3984 ntBASIC4.03□□□□□ -1.77
RCL1Q9Y2P8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.77
RCL1Q9Y2P8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 BRAFP1-201ENST00000445336 2703 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AC011155.1-201ENST00000316512 456 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 RNA5SP319-201ENST00000362768 119 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 RNU6-670P-201ENST00000364312 104 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AC019155.1-201ENST00000382242 574 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 RNA5SP339-201ENST00000390987 122 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 MIR1182-201ENST00000408363 97 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 BTF3P9-201ENST00000418784 283 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AL358176.3-201ENST00000420757 454 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 SUMO2P3-201ENST00000438311 288 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 DNAJA1P5-201ENST00000440278 943 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 ARL4AP3-201ENST00000441452 574 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 TDGF1P1-201ENST00000445734 527 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 APOOP2-201ENST00000461561 539 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 AP000942.1-201ENST00000463969 747 ntBASIC4.02□□□□□ -1.77
RCL1Q9Y2P8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms