Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNU6-729P-201ENST00000384399 107 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC013404.1-201ENST00000413068 249 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AL139421.1-201ENST00000423010 169 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 IFNNP1-201ENST00000429219 553 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 DLGAP5P1-201ENST00000430307 464 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AL445466.1-201ENST00000448432 357 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC005077.1-201ENST00000449226 375 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC084754.1-201ENST00000463466 464 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC098847.1-201ENST00000473094 348 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 GAPDHP36-201ENST00000480688 918 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC104108.1-201ENST00000509930 412 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 UBE2NP1-201ENST00000545592 458 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AL358913.1-201ENST00000554342 121 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 CYCSP38-201ENST00000559840 322 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 BNIP3P26-201ENST00000600827 554 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 RN7SKP299-201ENST00000606679 301 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC073114.1-201ENST00000612027 490 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AL158063.1-201ENST00000615349 536 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC011472.4-201ENST00000615848 491 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC121761.2-201ENST00000617300 689 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC007342.8-201ENST00000623278 678 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 CAP1P2-201ENST00000417455 1409 ntBASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PPARGC1AQ9UBK2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PPARGC1AQ9UBK2 LYARP1-201ENST00000436977 1501 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 MTND5P29-201ENST00000458676 1807 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 RNA5SP433-201ENST00000364491 114 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 MYL6P5-201ENST00000412707 459 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 TCEA1P4-201ENST00000415066 844 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 USP9YP31-201ENST00000431405 881 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AL731534.1-201ENST00000434711 269 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 ATP5LP2-201ENST00000440646 311 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 MTND3P1-201ENST00000441336 220 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 RPL21P134-201ENST00000453468 483 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 CCDC11P1-201ENST00000503137 1162 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AC104090.1-201ENST00000506341 1171 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AC138866.2-201ENST00000508650 584 ntBASIC6.21□□□□□ -1.42
PPARGC1AQ9UBK2 AC026782.2-201ENST00000510845 636 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms