Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC090686.1-201ENST00000481577 749 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RN7SL802P-201ENST00000577858 299 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 MIR3667-201ENST00000581025 74 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 ELOCP28-201ENST00000590044 317 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 RNF138P2-201ENST00000603490 592 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 AL359757.1-201ENST00000623176 255 ntBASIC4.55□□□□□ -1.68
CCDC88CQ9P219 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 SCARNA15-201ENST00000607520 4325 ntBASIC4.54□□□□□ -1.68
CCDC88CQ9P219 LRRC37BP1-201ENST00000398851 714 ntBASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AC093249.4-201ENST00000564755 259 ntBASIC4.54□□□□□ -1.68
CCDC88CQ9P219 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AC135068.12-201ENST00000637370 931 ntBASIC4.54□□□□□ -1.68
CCDC88CQ9P219 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AL359922.3-201ENST00000624779 1670 ntBASIC4.54□□□□□ -1.68
CCDC88CQ9P219 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 TCP11X1-202ENST00000622971 1372 ntBASIC4.54□□□□□ -1.68
CCDC88CQ9P219 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC88CQ9P219 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 RNA5SP332-201ENST00000391063 115 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 RAB28P1-201ENST00000411517 641 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 RPS5P7-201ENST00000456664 608 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 OR5M7P-201ENST00000526140 972 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 MIR4737-201ENST00000583979 81 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 KARSP3-201ENST00000571212 1504 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL137100.1-201ENST00000556703 1620 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC126323.6-202ENST00000568092 3511 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL132640.2-201ENST00000559968 1698 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 TCP1P3-201ENST00000414406 1498 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL603750.1-201ENST00000624216 1717 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC068538.1-201ENST00000376856 336 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 TBCAP2-201ENST00000416175 326 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL121878.1-201ENST00000418638 859 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC004980.3-201ENST00000447046 365 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 MRPL35P2-201ENST00000448009 511 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 OR52A4P-201ENST00000472867 958 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 RPL23AP37-201ENST00000479658 549 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC116562.1-201ENST00000485355 781 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC073073.1-201ENST00000493920 463 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 OR5M2P-201ENST00000529003 936 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AL512310.9-201ENST00000553311 948 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 AC006363.1-201ENST00000603806 463 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 IMMP1LP1-201ENST00000605170 488 ntBASIC4.53□□□□□ -1.68
CCDC88CQ9P219 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC88CQ9P219 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.53□□□□□ -1.69
CCDC88CQ9P219 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AL049693.1-201ENST00000402760 611 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC88CQ9P219 AURKAPS2-201ENST00000454983 333 ntBASIC4.52□□□□□ -1.69
CCDC88CQ9P219 RPS23P7-201ENST00000466210 444 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms