Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 CYP2C60P-201ENST00000566088 139 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC095057.3-201ENST00000567102 1157 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 ZNF92P3-201ENST00000596594 954 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 Z94722.1-201ENST00000604328 474 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 NANOGP3-201ENST00000605855 286 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC016877.3-201ENST00000606778 504 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AL445423.1-201ENST00000609941 536 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC100847.1-201ENST00000611316 481 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AC011472.4-201ENST00000615848 491 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AL118522.2-201ENST00000616045 615 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 OR1S1-201ENST00000624470 978 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 LINC02211-204ENST00000642024 1070 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 SAMMSON-227ENST00000642114 1199 ntBASIC5.82□□□□□ -1.48
TDP1Q9NUW8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TDP1Q9NUW8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL442128.2-201ENST00000620246 1824 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC007159.1-201ENST00000566529 4706 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC109780.1-201ENST00000451768 1344 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC093297.3-201ENST00000607056 2517 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC005225.5-201ENST00000623547 2225 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 SNORA74A-201ENST00000364089 198 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RNU6-185P-201ENST00000384421 107 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 MIR223-201ENST00000385204 110 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RPL7P58-201ENST00000402913 758 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 ELOCP9-201ENST00000418624 239 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 SLC35E1P1-201ENST00000419313 864 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 CRIP1P1-201ENST00000427567 185 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 OR6D1P-201ENST00000436165 939 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 CDC42P1-201ENST00000456658 548 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RN7SL172P-201ENST00000460535 303 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC107015.1-201ENST00000466902 747 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RN7SL727P-201ENST00000482164 296 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 OR5M14P-201ENST00000506803 618 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC010486.3-201ENST00000511602 785 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 SNORA3.4-201ENST00000515969 96 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC135279.1-201ENST00000543493 504 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL049779.2-201ENST00000553847 315 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC080013.6-201ENST00000606185 215 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC024257.5-201ENST00000612739 531 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC025574.2-201ENST00000615621 514 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AL356274.1-201ENST00000617064 410 ntBASIC5.81□□□□□ -1.48
TDP1Q9NUW8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TDP1Q9NUW8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms