Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC105918.1-201ENST00000474399 838 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 NPM1P29-201ENST00000483112 803 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 MEMO1P5-201ENST00000604810 406 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC104118.1-201ENST00000607625 1589 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AL356274.1-201ENST00000617064 410 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC015908.5-201ENST00000623289 343 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AP001642.1-201ENST00000624727 2117 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 SCARNA15-201ENST00000607520 4325 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC079298.1-201ENST00000625026 1619 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 ZNF652P1-201ENST00000442420 1309 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 MIR365B-201ENST00000362317 111 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AP002530.1-201ENST00000405705 684 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 RPL34P6-201ENST00000432390 345 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AL161722.2-201ENST00000434731 981 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 OR7H2P-201ENST00000513483 306 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 RNU6-319P-201ENST00000516025 108 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 MIR4737-201ENST00000583979 81 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 OR7M1P-201ENST00000608946 533 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AL161616.1-201ENST00000611867 286 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TM9SF3Q9HD45 AC112198.2-201ENST00000426589 6996 ntBASIC5.09□□□□□ -1.6
TM9SF3Q9HD45 AL731566.1-201ENST00000620490 1937 ntBASIC5.09□□□□□ -1.6
TM9SF3Q9HD45 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TM9SF3Q9HD45 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.09□□□□□ -1.6
TM9SF3Q9HD45 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.09□□□□□ -1.6
TM9SF3Q9HD45 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
TM9SF3Q9HD45 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC004817.4-201ENST00000602396 3625 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 DDX18P3-201ENST00000404856 2007 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 SNORA66-201ENST00000384792 133 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 RPL12P9-201ENST00000412942 488 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AL590139.1-201ENST00000416267 400 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 RPL23AP4-201ENST00000427757 463 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC124944.2-201ENST00000429866 1242 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC112498.1-201ENST00000444401 332 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AL354710.1-201ENST00000453641 246 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC069277.2-201ENST00000454211 432 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC245028.2-201ENST00000458673 253 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC022336.1-201ENST00000475510 337 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC093827.1-201ENST00000480094 861 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC022133.1-201ENST00000490961 571 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 RPS12P31-201ENST00000491419 398 ntBASIC5.08□□□□□ -1.6
TM9SF3Q9HD45 AC008897.1-201ENST00000494006 347 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms