Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 RNU1-130P-201ENST00000363930 160 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 RPL11P3-201ENST00000395256 523 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC011998.1-201ENST00000433403 117 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 DNAJA1P6-201ENST00000437347 354 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 SCAND3P1-201ENST00000439854 1060 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 snoU109.5-201ENST00000516231 132 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC091979.2-201ENST00000607514 214 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC012409.3-201ENST00000611343 981 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 SNORD8-201ENST00000363915 110 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 RNU6ATAC-201ENST00000408749 126 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC104978.1-201ENST00000449387 391 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC022360.1-201ENST00000521058 340 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AL049839.1-201ENST00000556151 657 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC006116.5-201ENST00000591936 559 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC115621.1-201ENST00000604653 858 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC244107.2-201ENST00000611773 76 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 MIR6852-201ENST00000621699 66 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 AC133552.1-201ENST00000569988 4007 ntBASIC4.46□□□□□ -1.7
CHD8Q9HCK8 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 AC025164.1-201ENST00000496249 478 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 CRIP1P1-201ENST00000427567 185 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 AL512649.1-201ENST00000428997 581 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 RN7SL652P-201ENST00000577769 300 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 AC069061.3-201ENST00000582254 823 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHD8Q9HCK8 AC108467.2-201ENST00000617640 1597 ntBASIC4.45□□□□□ -1.7
CHD8Q9HCK8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 MTND5P1-201ENST00000445440 1375 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 RNA5SP366-201ENST00000365454 123 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 RNU1-82P-201ENST00000390851 165 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 YY1P1-201ENST00000427625 668 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 Y_RNA.638-201ENST00000459374 113 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms