Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4AQ9BY43 GTF2H2B-203ENST00000508065 1432 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC005005.4-201ENST00000623789 16698 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AL139811.1-201ENST00000424779 2299 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 OR5T3-201ENST00000303059 1023 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 OR8V1P-201ENST00000395193 873 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC005522.1-201ENST00000395416 346 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AL139148.1-201ENST00000427122 680 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC124944.2-201ENST00000429866 1242 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AL389915.2-201ENST00000454576 441 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC072052.1-201ENST00000496556 306 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC093763.2-201ENST00000505334 1223 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 GTF2F2P1-201ENST00000511083 675 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC012400.1-201ENST00000518452 381 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC024940.3-201ENST00000538551 316 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 NF1P5-201ENST00000588287 448 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AL008729.2-201ENST00000606393 473 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 SDR42E1P1-201ENST00000611327 477 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 AC135068.12-201ENST00000637370 931 ntBASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
CHMP4AQ9BY43 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CHMP4AQ9BY43 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CHMP4AQ9BY43 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CHMP4AQ9BY43 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 RNA5SP453-201ENST00000362503 119 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 MTND4P11-201ENST00000417020 1058 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 NANOGP4-201ENST00000427230 913 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 GEMIN8P3-201ENST00000445417 720 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 RPL5P30-201ENST00000465511 891 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 MTCO1P31-201ENST00000506355 492 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC079610.2-201ENST00000604818 690 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC079791.1-201ENST00000605356 973 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4AQ9BY43 AC063976.2-201ENST00000425667 3556 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms