Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AC021146.4-201ENST00000309229 279 ntBASIC7.14□□□□□ -1.27
SCAPERQ9BY12 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AC007618.1-201ENST00000366455 732 ntBASIC7.14□□□□□ -1.27
SCAPERQ9BY12 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 CASKP1-201ENST00000412870 582 ntBASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 Z95327.1-201ENST00000446082 482 ntBASIC7.14□□□□□ -1.27
SCAPERQ9BY12 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AC018695.5-201ENST00000605872 315 ntBASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 SNORA71.2-201ENST00000364941 134 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 RNA5SP171-201ENST00000391071 115 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 RNA5SP317-201ENST00000410176 116 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 RNA5SP311-201ENST00000411290 116 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 QRSL1P2-201ENST00000418582 964 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AL136231.1-201ENST00000429407 730 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 SETP4-201ENST00000455717 868 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AC073073.1-201ENST00000493920 463 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 SAP18P1-201ENST00000512058 390 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 RNA5SP315-201ENST00000516340 116 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 RNA5SP312-201ENST00000517068 116 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 MIR2116-201ENST00000517221 80 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AC010476.1-201ENST00000519111 851 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 SNORA74C-1-201ENST00000580726 201 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AC006130.2-201ENST00000586202 326 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AL591034.3-201ENST00000605511 685 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AP005019.3-201ENST00000620418 560 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 SOCS5P3-201ENST00000425115 1576 ntBASIC7.13□□□□□ -1.27
SCAPERQ9BY12 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SCAPERQ9BY12 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 RN7SKP224-201ENST00000364140 325 ntBASIC7.12□□□□□ -1.27
SCAPERQ9BY12 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 U3.23-201ENST00000391132 200 ntBASIC7.12□□□□□ -1.27
SCAPERQ9BY12 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 TRGV7-201ENST00000427089 353 ntBASIC7.12□□□□□ -1.27
SCAPERQ9BY12 RN7SL517P-201ENST00000462240 305 ntBASIC7.12□□□□□ -1.27
SCAPERQ9BY12 RNU6-709P-201ENST00000517257 104 ntBASIC7.12□□□□□ -1.27
SCAPERQ9BY12 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 AC005899.7-201ENST00000618199 588 ntBASIC7.12□□□□□ -1.27
SCAPERQ9BY12 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCAPERQ9BY12 AP005432.1-201ENST00000580891 3485 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 AMZ2P2-201ENST00000406819 1057 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 ACTR3P2-201ENST00000439585 1257 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 PHBP16-201ENST00000446318 950 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 H2AFZP5-201ENST00000446960 382 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 AC109446.4-201ENST00000623235 2755 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 AC092376.2-201ENST00000622621 4116 ntBASIC7.11□□□□□ -1.27
SCAPERQ9BY12 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCAPERQ9BY12 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 RPS26P8-201ENST00000393490 348 ntBASIC7.1□□□□□ -1.27
SCAPERQ9BY12 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCAPERQ9BY12 RN7SKP16-201ENST00000410180 299 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms