Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.41□□□□□ -1.54
RAD9AQ99638 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.41□□□□□ -1.54
RAD9AQ99638 SNORA70.11-201ENST00000515987 138 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 SNORA70.13-201ENST00000516116 138 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AC104997.1-201ENST00000519761 717 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AP003168.1-201ENST00000530091 307 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 DUX4L52-201ENST00000549363 777 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AC027281.1-201ENST00000574178 758 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AC027216.1-201ENST00000577726 685 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.41□□□□□ -1.54
RAD9AQ99638 AL020997.2-201ENST00000602607 184 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AL590392.1-201ENST00000604960 446 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 AL445423.1-201ENST00000609941 536 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 AC003001.2-201ENST00000616294 831 ntBASIC5.41□□□□□ -1.54
RAD9AQ99638 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RAD9AQ99638 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
RAD9AQ99638 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RAD9AQ99638 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RAD9AQ99638 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAD9AQ99638 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD9AQ99638 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAD9AQ99638 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RAD9AQ99638 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RAD9AQ99638 KARSP3-201ENST00000571212 1504 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 MIR365B-201ENST00000362317 111 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 RNU6-1320P-201ENST00000390838 107 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 RNU6-1269P-201ENST00000391139 107 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAD9AQ99638 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AC005154.2-201ENST00000438110 379 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.4□□□□□ -1.54
RAD9AQ99638 TXNP2-201ENST00000443918 295 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 TAAR4P-201ENST00000454843 1039 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 RNU6-599P-201ENST00000459383 107 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 RNU6-1193P-201ENST00000459461 107 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AC007537.2-201ENST00000472093 511 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 SOX5P1-201ENST00000524155 1127 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 OR7E10P-201ENST00000526420 991 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AP001804.2-201ENST00000533932 910 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.4□□□□□ -1.54
RAD9AQ99638 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.4□□□□□ -1.54
RAD9AQ99638 MIR4715-201ENST00000584117 79 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.4□□□□□ -1.54
RAD9AQ99638 AC005520.3-201ENST00000602874 370 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AC093765.1-201ENST00000603758 881 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AC005377.1-201ENST00000605126 456 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AL162574.2-201ENST00000614618 657 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AC007786.3-201ENST00000615154 596 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 AL122125.1-201ENST00000616999 600 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 RNU6-368P-201ENST00000620928 107 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 RNU6-538P-201ENST00000622329 107 ntBASIC5.4□□□□□ -1.54
RAD9AQ99638 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.55
RAD9AQ99638 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAD9AQ99638 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAD9AQ99638 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAD9AQ99638 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAD9AQ99638 AC093849.1-201ENST00000563631 2209 ntBASIC5.4□□□□□ -1.55
RAD9AQ99638 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAD9AQ99638 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAD9AQ99638 DHX40P1-201ENST00000588725 1412 ntBASIC5.4□□□□□ -1.55
RAD9AQ99638 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.39□□□□□ -1.55
RAD9AQ99638 AC006210.2-201ENST00000367074 1545 ntBASIC5.39□□□□□ -1.55
RAD9AQ99638 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.39□□□□□ -1.55
RAD9AQ99638 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RAD9AQ99638 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RAD9AQ99638 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RAD9AQ99638 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RAD9AQ99638 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 RN7SKP145-201ENST00000363291 303 ntBASIC5.39□□□□□ -1.55
RAD9AQ99638 RNU6-618P-201ENST00000363518 112 ntBASIC5.39□□□□□ -1.55
RAD9AQ99638 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAD9AQ99638 RNU6-729P-201ENST00000384399 107 ntBASIC5.39□□□□□ -1.55
RAD9AQ99638 GTF2IP5-201ENST00000414608 731 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms