Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC008814.1-201ENST00000603797 406 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AL158050.2-201ENST00000605336 568 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 CR589904.2-201ENST00000612533 440 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.11□□□□□ -1.59
PKP4Q99569 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.11□□□□□ -1.59
PKP4Q99569 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 AC145207.9-201ENST00000623802 325 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PKP4Q99569 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.11□□□□□ -1.59
PKP4Q99569 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.11□□□□□ -1.59
PKP4Q99569 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.11□□□□□ -1.59
PKP4Q99569 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 BX005019.1-201ENST00000561881 1810 ntBASIC5.11□□□□□ -1.59
PKP4Q99569 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKP4Q99569 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.11□□□□□ -1.59
PKP4Q99569 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC005294.1-201ENST00000355509 281 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 U3.2-201ENST00000362981 210 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 U3.3-201ENST00000362986 216 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 SNORA51.1-201ENST00000363243 140 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 BMS1P3-201ENST00000372011 932 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 RNU6-152P-201ENST00000384037 107 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 RNA5SP187-201ENST00000384400 119 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PKP4Q99569 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 CCNB2P1-201ENST00000399411 1150 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.1□□□□□ -1.59
PKP4Q99569 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC009302.1-201ENST00000417147 390 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 SLC35E1P1-201ENST00000419313 864 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 OR5M12P-201ENST00000423388 929 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 MTCO1P11-201ENST00000429111 1528 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC011242.1-201ENST00000433596 1158 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 Z80107.1-201ENST00000436830 412 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC243772.1-201ENST00000451620 410 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 CBX1P2-201ENST00000453841 458 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 RPS3AP53-201ENST00000454716 778 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 MTATP6P14-201ENST00000455189 673 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 RN7SL189P-201ENST00000468631 289 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 GTF2IP9-201ENST00000502460 301 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC098862.1-201ENST00000504991 413 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC027369.5-201ENST00000533838 755 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC007225.2-201ENST00000562529 256 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 RN7SL708P-201ENST00000580952 299 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC006116.5-201ENST00000591936 559 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC011493.1-201ENST00000596753 1632 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 AC013244.3-201ENST00000605614 388 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AL034549.2-201ENST00000618285 3373 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AL445493.3-201ENST00000619568 477 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AL445437.1-201ENST00000623157 3087 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.1□□□□□ -1.59
PKP4Q99569 AP006248.3-201ENST00000623580 594 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.1□□□□□ -1.59
PKP4Q99569 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 AC093591.2-201ENST00000565254 3843 ntBASIC5.1□□□□□ -1.59
PKP4Q99569 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PKP4Q99569 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
PKP4Q99569 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PKP4Q99569 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms