Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RPL5P16-201ENST00000471467 790 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 RN7SL319P-201ENST00000480656 221 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC004453.1-201ENST00000487895 408 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 TCP11X3P-202ENST00000514289 1254 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 EIF4EP5-201ENST00000528228 640 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC005377.1-201ENST00000605126 456 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AL354950.1-201ENST00000614150 568 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC091905.4-201ENST00000623432 202 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC073429.2-201ENST00000569694 1444 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 AC009643.2-201ENST00000603543 1448 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 CASC19-206ENST00000641028 1430 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 ECM1P2-201ENST00000503354 1577 ntBASIC4.6□□□□□ -1.67
COL21A1Q96P44 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL21A1Q96P44 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL21A1Q96P44 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC136624.1-201ENST00000400791 413 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 TTC39DP-201ENST00000416781 1688 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AL358176.3-201ENST00000420757 454 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 AL589765.3-201ENST00000446084 462 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL21A1Q96P44 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 snoU13.20-201ENST00000459180 104 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 TRBV8-1-201ENST00000481590 279 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 RPL37AP8-201ENST00000494116 276 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC140172.1-201ENST00000502928 141 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 RFPL4AP3-201ENST00000515267 345 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AP002981.1-201ENST00000517692 975 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 DDX18P5-201ENST00000534547 1306 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 TVP23CP2-201ENST00000571473 623 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 MIR4700-201ENST00000578311 74 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC087468.1-201ENST00000604365 630 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 MEMO1P5-201ENST00000604810 406 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AL451049.1-201ENST00000608672 497 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 OR8G7P-201ENST00000616658 848 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 AC019206.1-201ENST00000621938 425 ntBASIC4.59□□□□□ -1.67
COL21A1Q96P44 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
COL21A1Q96P44 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 DDX18P4-201ENST00000511690 1966 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 MTND5P23-201ENST00000430812 1655 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 SNORA74A-201ENST00000364089 198 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 AL592291.1-201ENST00000403830 352 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 AF186996.5-201ENST00000418098 904 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 PRPF38AP2-201ENST00000438179 851 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 RN7SL517P-201ENST00000462240 305 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 RN7SL329P-201ENST00000467740 299 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 RN7SL97P-201ENST00000486780 299 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 RPS23P1-201ENST00000491662 432 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 AC087783.2-201ENST00000605070 562 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL21A1Q96P44 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.58□□□□□ -1.68
COL21A1Q96P44 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.58□□□□□ -1.68
COL21A1Q96P44 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms