Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RPL23AP61-201ENST00000623642 466 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 CU459211.1-201ENST00000635667 749 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 CYP4F35P-202ENST00000636121 390 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 MFSD8-220ENST00000641243 1422 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 AC091046.3-201ENST00000631455 1574 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 HSPD1P8-201ENST00000400121 1658 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 SPATA2P1-201ENST00000431223 2055 ntBASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
SMC1BQ8NDV3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 RNA5SP505-201ENST00000364748 108 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 RPS6P23-201ENST00000413224 722 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC007568.1-201ENST00000422912 471 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 PRUNEP1-201ENST00000425846 705 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC015983.1-201ENST00000441577 373 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 RPS27AP3-201ENST00000453803 454 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC112187.1-201ENST00000455837 479 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 ACA64.4-201ENST00000459070 127 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 RNU1-88P-201ENST00000459274 128 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AL035690.1-201ENST00000490892 383 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 MTND4LP2-201ENST00000502312 285 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 UBTFL10-201ENST00000528532 562 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 LRRC6P1-201ENST00000532188 885 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC127381.1-201ENST00000555979 939 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AL132640.2-201ENST00000559968 1698 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC245036.5-201ENST00000596330 847 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC019131.2-201ENST00000609071 870 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC109583.2-201ENST00000617367 129 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 MIR7703-201ENST00000620784 77 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC099494.2-201ENST00000623371 978 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC120349.3-201ENST00000624377 529 ntBASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SMC1BQ8NDV3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC099786.3-201ENST00000565735 1410 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RNU5B-1-201ENST00000363286 116 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RN7SKP227-201ENST00000364445 330 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RNA5SP479-201ENST00000364858 117 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AL034403.1-201ENST00000399414 885 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AL603865.2-201ENST00000401679 213 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 MTCO2P21-201ENST00000419780 677 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC009480.2-201ENST00000422916 432 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC093084.1-201ENST00000424233 687 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AC005189.1-201ENST00000431286 310 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RPS3AP38-201ENST00000435889 763 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 Z73417.1-201ENST00000447373 778 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AL513533.1-201ENST00000453728 415 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 RPL10P17-201ENST00000453852 316 ntBASIC6.62□□□□□ -1.35
SMC1BQ8NDV3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms