Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-1120P-201ENST00000362988 108 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 Y_RNA.431-201ENST00000384086 102 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 MIR128-2-201ENST00000384893 84 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 RN7SKP89-201ENST00000410774 242 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 SLC35E1P1-201ENST00000419313 864 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC048351.1-201ENST00000420064 602 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 RPSAP59-201ENST00000421048 890 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AL365400.1-201ENST00000431854 640 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AL590682.1-201ENST00000437248 344 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 RPL36AP15-201ENST00000444514 266 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC127024.1-201ENST00000490847 418 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC090453.1-201ENST00000495560 436 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC011352.2-201ENST00000514574 1016 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 RNU6-714P-201ENST00000516963 103 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AP004833.3-201ENST00000531893 322 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 NUTF2P2-201ENST00000551207 384 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 MRPS21P9-201ENST00000571150 257 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 MAGOH2P-202ENST00000584384 429 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AP005329.3-201ENST00000609924 686 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 MIR6761-201ENST00000617899 72 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC024940.5-201ENST00000622889 474 ntBASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.91□□□□□ -1.3
DEPDC4Q8N2C3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 OLMALINC-203ENST00000641087 3779 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 MIR555-201ENST00000384987 96 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 MIR575-201ENST00000385013 94 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 DHFRP6-201ENST00000401776 268 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 BTBD10P2-201ENST00000404779 676 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 RNU2-22P-201ENST00000411266 212 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AL161454.1-201ENST00000446226 569 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AL031736.1-201ENST00000449688 618 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 PRPF38AP1-201ENST00000451976 933 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 RPL7P15-201ENST00000461190 712 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 SNORA19.2-201ENST00000516013 114 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC011611.1-201ENST00000552179 197 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AC078814.3-201ENST00000553036 491 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.9□□□□□ -1.3
DEPDC4Q8N2C3 NPM1P42-201ENST00000560329 862 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms