Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC068287.1-201ENST00000430283 295 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AL359265.1-201ENST00000440296 795 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC073264.2-201ENST00000448886 166 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 AL513533.1-201ENST00000453728 415 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC063943.1-201ENST00000465434 453 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 RN7SL817P-201ENST00000480777 288 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC010350.1-201ENST00000504908 231 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 SEPT10P1-201ENST00000517342 1162 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 OR8G5-201ENST00000524943 1041 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 BGLT3-201ENST00000564523 994 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 UBE2FP2-201ENST00000566646 462 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC069431.2-201ENST00000604149 1099 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC245008.1-201ENST00000608123 476 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 AC097460.3-201ENST00000623099 442 ntBASIC6.4□□□□□ -1.38
SYNE4Q8N205 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SYNE4Q8N205 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.4□□□□□ -1.38
SYNE4Q8N205 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE4Q8N205 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE4Q8N205 AL513185.3-201ENST00000433335 1300 ntBASIC6.4□□□□□ -1.39
SYNE4Q8N205 MFSD8-213ENST00000641134 1327 ntBASIC6.4□□□□□ -1.39
SYNE4Q8N205 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE4Q8N205 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE4Q8N205 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE4Q8N205 AC005261.6-201ENST00000623072 1387 ntBASIC6.4□□□□□ -1.39
SYNE4Q8N205 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE4Q8N205 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE4Q8N205 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE4Q8N205 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE4Q8N205 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE4Q8N205 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.4□□□□□ -1.39
SYNE4Q8N205 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SYNE4Q8N205 AL132656.3-201ENST00000606384 1595 ntBASIC6.4□□□□□ -1.39
SYNE4Q8N205 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE4Q8N205 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC092681.1-201ENST00000297369 291 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE4Q8N205 RNU1-74P-201ENST00000384108 171 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AL356057.1-202ENST00000402263 756 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 AP002530.1-201ENST00000405705 684 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC119751.6-201ENST00000416712 186 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC004074.1-201ENST00000421810 1063 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 RPL34P27-201ENST00000428810 349 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 ELOCP11-201ENST00000436690 332 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 RPL7P11-201ENST00000437586 658 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 MTCYBP31-201ENST00000438855 1122 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 ELOCP16-201ENST00000444494 332 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 IGHV5-78-201ENST00000450948 295 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 RN7SL189P-201ENST00000468631 289 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 OR9N1P-201ENST00000491296 333 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC020699.1-201ENST00000505161 445 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 MTATP6P15-201ENST00000527233 835 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 MTND2P17-201ENST00000550281 688 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 AP002967.1-201ENST00000624203 539 ntBASIC6.39□□□□□ -1.39
SYNE4Q8N205 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SYNE4Q8N205 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.39□□□□□ -1.39
SYNE4Q8N205 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 SDAD1P1-202ENST00000524156 2051 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 OR9G4-201ENST00000302957 984 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SYNE4Q8N205 RNU4-39P-201ENST00000362455 127 ntBASIC6.38□□□□□ -1.39
SYNE4Q8N205 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SYNE4Q8N205 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms