Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AL451049.1-201ENST00000608672 497 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC020633.1-201ENST00000468439 2247 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC009962.1-201ENST00000567327 3813 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 SMG1P7-201ENST00000565246 2704 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AL121886.1-201ENST00000358609 435 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 RNU6-666P-201ENST00000363499 107 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 ATP5HP3-201ENST00000396994 486 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 HSPA8P15-201ENST00000401676 786 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 RPL5P19-201ENST00000404228 893 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 RNU4-74P-201ENST00000411280 161 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 OR10T1P-201ENST00000424327 947 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 HSPE1P22-201ENST00000456856 327 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AL139022.2-201ENST00000606934 443 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AL356274.1-201ENST00000617064 410 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AL138955.1-201ENST00000622881 1040 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 ADAM24P-201ENST00000398655 2101 ntBASIC5.75□□□□□ -1.49
HERC6Q8IVU3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HERC6Q8IVU3 AL353796.1-201ENST00000561542 3241 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 RNU6-398P-201ENST00000384143 109 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AL035405.1-201ENST00000400795 710 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 XKRYP4-201ENST00000414395 483 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AL133482.1-201ENST00000415988 498 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 MTCO2P1-201ENST00000424648 477 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 CACYBPP1-201ENST00000438592 684 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 XKRYP5-201ENST00000449659 483 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC092905.1-201ENST00000467527 949 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC096741.1-201ENST00000472250 846 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC092754.1-201ENST00000472975 479 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC026782.2-201ENST00000510845 636 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 HAUS1P3-201ENST00000523909 662 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 C1DP5-201ENST00000525775 383 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 OR8Q1P-201ENST00000526467 655 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 OR5AM1P-201ENST00000532136 1032 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC009117.1-201ENST00000563948 554 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC122134.1-202ENST00000569111 1201 ntBASIC5.74□□□□□ -1.49
HERC6Q8IVU3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms