Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 RN7SL52P-201ENST00000584271 284 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC130352.1-201ENST00000602979 661 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC140113.4-201ENST00000622087 222 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 AC004232.3-201ENST00000622977 525 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 SYT14P1-202ENST00000600441 1448 ntBASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
NUDCD3Q8IVD9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 HSPA8P18-201ENST00000439846 1928 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC107021.2-201ENST00000567714 2095 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 SNORA68.2-201ENST00000391263 128 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 RNA5SP345-201ENST00000410646 108 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 CEACAMP8-201ENST00000413902 580 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 DDX39BP1-205ENST00000422507 192 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC104651.2-201ENST00000447549 528 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC144530.1-201ENST00000452862 555 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC092647.2-201ENST00000452998 253 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC005008.1-201ENST00000456151 612 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 RN7SL97P-201ENST00000486780 299 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 HMGN2P25-201ENST00000486956 268 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AL049839.1-201ENST00000556151 657 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 OR7M1P-201ENST00000608946 533 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 NF1P10-201ENST00000613227 742 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 MIR6837-201ENST00000620884 64 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 AC026124.2-201ENST00000621847 656 ntBASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUDCD3Q8IVD9 UGT2B26P-201ENST00000508672 1613 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 U3.2-201ENST00000362981 210 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 SNORA17A-201ENST00000391185 133 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL358176.3-201ENST00000420757 454 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 RPL34P20-201ENST00000442771 351 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 RN7SL817P-201ENST00000480777 288 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 RPL7P39-201ENST00000481157 744 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC104109.1-201ENST00000498563 436 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 COX6B1P5-201ENST00000509843 249 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 RNA5SP43-201ENST00000516559 110 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL121839.1-201ENST00000556233 1185 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 MIR3614-201ENST00000581261 86 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AP000919.1-201ENST00000582850 985 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AC010424.2-201ENST00000607594 443 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 AL022401.1-201ENST00000619498 108 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 SNORA17.5-201ENST00000630429 132 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 EOGT-210ENST00000615922 1931 ntBASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUDCD3Q8IVD9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms