Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SYCE2Q6PIF2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYCE2Q6PIF2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYCE2Q6PIF2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYCE2Q6PIF2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYCE2Q6PIF2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC004158.1-201ENST00000564508 4319 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RNU6-819P-201ENST00000364116 107 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RN7SKP126-201ENST00000411143 300 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 KRR1P1-201ENST00000419430 803 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RPS3AP44-201ENST00000425466 790 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 USP9YP25-201ENST00000457708 443 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC009127.1-201ENST00000467090 155 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RN7SL591P-201ENST00000496150 292 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RPS4XP20-201ENST00000505751 772 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 MTND6P2-201ENST00000512226 524 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC004980.4-201ENST00000513375 203 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RNA5SP373-201ENST00000517271 95 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AP004607.2-201ENST00000533949 322 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL049874.4-201ENST00000557593 255 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC090888.1-201ENST00000561335 1141 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC068790.6-201ENST00000602558 258 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL109653.1-201ENST00000603091 248 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 Z99497.2-201ENST00000603634 310 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 NANOGP3-201ENST00000605855 286 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL022394.1-201ENST00000606979 292 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL353600.1-201ENST00000608148 251 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AL591135.1-201ENST00000401578 5914 ntBASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
SYCE2Q6PIF2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 MTND4P8-201ENST00000514997 1362 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 TCP11X1-202ENST00000622971 1372 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC021755.1-201ENST00000559747 1447 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 RNA5SP453-201ENST00000362503 119 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 RAB28P1-201ENST00000411517 641 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC016397.1-201ENST00000412463 242 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 MTCO1P21-201ENST00000416634 589 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC090960.1-201ENST00000421072 306 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 CRIP1P1-201ENST00000427567 185 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL672138.1-201ENST00000450604 1015 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL445687.2-201ENST00000458156 728 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC092324.1-201ENST00000468671 324 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 TRBV5-2-201ENST00000489095 273 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 RNU4-18P-201ENST00000516751 149 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC009097.3-201ENST00000563557 1018 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC019322.1-201ENST00000571869 389 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AP005403.1-201ENST00000579720 229 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 NTAN1P1-201ENST00000603150 646 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC087283.1-201ENST00000604029 1074 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 AC005084.1-201ENST00000605160 304 ntBASIC5.69□□□□□ -1.5
SYCE2Q6PIF2 VN1R9P-201ENST00000614184 867 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms