Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC022832.1-201ENST00000530718 645 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 OR52K3P-201ENST00000531655 943 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL078601.3-201ENST00000573303 535 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 MIR4528-201ENST00000577763 90 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL138895.2-201ENST00000603019 178 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC097467.4-201ENST00000605504 141 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC012360.2-201ENST00000609349 391 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL138960.1-201ENST00000613838 513 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC002553.4-201ENST00000616896 331 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 MIR4302-201ENST00000638058 60 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC089998.1-201ENST00000548575 3141 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC091305.2-201ENST00000624049 1576 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 IMMTP1-201ENST00000435590 2219 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 MAPK10-270ENST00000641102 3538 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL022323.4-201ENST00000623980 13120 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF43Q68DV7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 RNU6-560P-201ENST00000364007 108 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 SNORD65C-201ENST00000390962 71 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC003045.1-201ENST00000398779 713 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 OR2W4P-201ENST00000406496 926 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 RANP6-201ENST00000413691 644 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC233728.2-201ENST00000425348 757 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 NDUFA5P4-201ENST00000436704 385 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC110602.1-201ENST00000437414 318 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 RPL23AP76-201ENST00000441860 458 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 VN1R10P-201ENST00000447106 875 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 BUD31P2-201ENST00000449374 300 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 TVP23CP1-201ENST00000450317 639 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC072039.1-201ENST00000477611 581 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 RPL7P42-201ENST00000481005 679 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 SNORA74.1-201ENST00000516320 180 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 RNU6-943P-201ENST00000516960 98 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC008429.2-201ENST00000523057 864 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 RPL3P13-201ENST00000550415 216 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC012146.2-201ENST00000576545 416 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC026898.1-201ENST00000586404 571 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AC103792.1-201ENST00000603591 919 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 AL135999.3-201ENST00000610501 812 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RNF43Q68DV7 AL122023.1-201ENST00000622847 530 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 MTND5P42-201ENST00000637720 498 ntBASIC6.76□□□□□ -1.33
RNF43Q68DV7 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms