Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 AC115283.1-201ENST00000427353 400 ntBASIC4.97□□□□□ -1.61
CBX1P83916 DSTNP5-201ENST00000427921 523 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.97□□□□□ -1.61
CBX1P83916 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.97□□□□□ -1.61
CBX1P83916 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.97□□□□□ -1.61
CBX1P83916 SCAND3P1-201ENST00000439854 1060 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.97□□□□□ -1.61
CBX1P83916 GAPDHP25-201ENST00000447061 1001 ntBASIC4.97□□□□□ -1.61
CBX1P83916 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.97□□□□□ -1.61
CBX1P83916 PPIAP27-201ENST00000453800 265 ntBASIC4.97□□□□□ -1.61
CBX1P83916 RN7SL443P-201ENST00000464331 290 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC090013.1-201ENST00000485147 480 ntBASIC4.97□□□□□ -1.61
CBX1P83916 RN7SL205P-201ENST00000490174 284 ntBASIC4.97□□□□□ -1.61
CBX1P83916 RNA5SP446-201ENST00000515955 82 ntBASIC4.97□□□□□ -1.61
CBX1P83916 RN7SKP183-201ENST00000517169 324 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.97□□□□□ -1.61
CBX1P83916 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.97□□□□□ -1.61
CBX1P83916 HMGB1P42-201ENST00000532126 553 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CBX1P83916 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.97□□□□□ -1.61
CBX1P83916 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.97□□□□□ -1.61
CBX1P83916 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.97□□□□□ -1.61
CBX1P83916 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CBX1P83916 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CBX1P83916 RPL7P50-201ENST00000600588 727 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC124916.2-201ENST00000604416 224 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AL592494.3-201ENST00000609485 464 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AL591926.8-201ENST00000616876 211 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC233309.1-201ENST00000619522 751 ntBASIC4.97□□□□□ -1.61
CBX1P83916 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.97□□□□□ -1.61
CBX1P83916 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CBX1P83916 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CBX1P83916 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CBX1P83916 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.61
CBX1P83916 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CBX1P83916 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CBX1P83916 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX1P83916 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CBX1P83916 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX1P83916 TMSB4XP2-201ENST00000335179 210 ntBASIC4.96□□□□□ -1.62
CBX1P83916 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX1P83916 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CBX1P83916 RPL5P19-201ENST00000404228 893 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.96□□□□□ -1.62
CBX1P83916 CASKP1-201ENST00000412870 582 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX1P83916 BX323845.3-201ENST00000428215 527 ntBASIC4.96□□□□□ -1.62
CBX1P83916 RPS29P10-201ENST00000439197 166 ntBASIC4.96□□□□□ -1.62
CBX1P83916 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX1P83916 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX1P83916 YRDCP3-201ENST00000456507 480 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC068228.1-201ENST00000461723 211 ntBASIC4.96□□□□□ -1.62
CBX1P83916 RN7SL168P-201ENST00000463821 279 ntBASIC4.96□□□□□ -1.62
CBX1P83916 RPL23AP71-201ENST00000470966 469 ntBASIC4.96□□□□□ -1.62
CBX1P83916 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 AC106822.1-201ENST00000502647 526 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC083829.1-201ENST00000503756 657 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC015795.1-201ENST00000513669 327 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 AC090151.1-201ENST00000520784 730 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX1P83916 AC107016.1-201ENST00000550463 337 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX1P83916 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX1P83916 MRPS21P7-201ENST00000566937 238 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX1P83916 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX1P83916 FAM60CP-201ENST00000591086 664 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC020914.4-201ENST00000597690 277 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AC124856.1-201ENST00000600819 896 ntBASIC4.96□□□□□ -1.62
CBX1P83916 AL031666.3-201ENST00000609320 1006 ntBASIC4.96□□□□□ -1.62
CBX1P83916 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CBX1P83916 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX1P83916 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX1P83916 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX1P83916 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CBX1P83916 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
CBX1P83916 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX1P83916 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
CBX1P83916 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.95□□□□□ -1.62
CBX1P83916 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX1P83916 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.95□□□□□ -1.62
CBX1P83916 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.95□□□□□ -1.62
CBX1P83916 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX1P83916 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX1P83916 COX6B1P3-201ENST00000312310 260 ntBASIC4.95□□□□□ -1.62
CBX1P83916 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.95□□□□□ -1.62
CBX1P83916 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CBX1P83916 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms