Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC015724.1-201ENST00000478577 156 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 Y_RNA.667-201ENST00000516212 107 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.33□□□□□ -1.56
SUMO3P55854 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC087465.1-201ENST00000560574 245 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 COX6CP7-201ENST00000597056 208 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC124856.1-201ENST00000600819 896 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 BNIP3P26-201ENST00000600827 554 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC079315.1-201ENST00000602952 623 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC105227.2-201ENST00000615075 605 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 MIR6071-201ENST00000616741 78 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 AC010329.2-201ENST00000595195 2737 ntBASIC5.33□□□□□ -1.56
SUMO3P55854 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.33□□□□□ -1.56
SUMO3P55854 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SUMO3P55854 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SUMO3P55854 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.32□□□□□ -1.56
SUMO3P55854 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SUMO3P55854 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 AL512646.1-201ENST00000269395 1077 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 RNA5SP273-201ENST00000362484 113 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SUMO3P55854 SNORD116-8-201ENST00000384365 95 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 GSTA8P-201ENST00000404253 637 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SUMO3P55854 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 TNPO1P1-201ENST00000423641 1138 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 CRIP1P1-201ENST00000427567 185 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 USP24P1-201ENST00000433802 779 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC110602.1-201ENST00000437414 318 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 CYCSP51-201ENST00000443545 318 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 MTND2P22-201ENST00000444325 1033 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AL354710.1-201ENST00000453641 246 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 ACA64.1-201ENST00000459171 127 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC006539.1-201ENST00000481419 501 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 VPS26AP1-201ENST00000483197 979 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC104971.1-201ENST00000495117 578 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 DYNLL1P6-201ENST00000503440 264 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC010486.2-201ENST00000505572 483 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC105384.2-201ENST00000508433 640 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC074255.1-201ENST00000511259 501 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 NDUFB4P12-201ENST00000513465 390 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC118465.1-201ENST00000513820 1271 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 RNU6-347P-201ENST00000516658 105 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 CDC42P3-201ENST00000518493 633 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 AP000926.4-201ENST00000527351 454 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 HMGN2P36-201ENST00000529541 409 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 PDCL2P2-201ENST00000533651 189 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC010198.2-201ENST00000550612 259 ntBASIC5.32□□□□□ -1.56
SUMO3P55854 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.32□□□□□ -1.56
SUMO3P55854 AC013444.2-201ENST00000603317 787 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms