Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
LIM2P55344 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
LIM2P55344 SNORA58B-201ENST00000364259 136 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.58□□□□□ -1.68
LIM2P55344 RN7SKP125-201ENST00000410481 302 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.58□□□□□ -1.68
LIM2P55344 RPS26P13-201ENST00000419030 330 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC006455.6-201ENST00000426192 893 ntBASIC4.58□□□□□ -1.68
LIM2P55344 MGAT2P2-201ENST00000427194 797 ntBASIC4.58□□□□□ -1.68
LIM2P55344 PA2G4P6-201ENST00000438325 1197 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 RPL31P44-201ENST00000447680 377 ntBASIC4.58□□□□□ -1.68
LIM2P55344 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.58□□□□□ -1.68
LIM2P55344 AURKAPS2-201ENST00000454983 333 ntBASIC4.58□□□□□ -1.68
LIM2P55344 RNA5SP103-201ENST00000459503 118 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.58□□□□□ -1.68
LIM2P55344 RN7SL826P-201ENST00000479724 288 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC008410.1-201ENST00000483777 339 ntBASIC4.58□□□□□ -1.68
LIM2P55344 RN7SL558P-201ENST00000497468 299 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.58□□□□□ -1.68
LIM2P55344 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.58□□□□□ -1.68
LIM2P55344 RNU6-319P-201ENST00000516025 108 ntBASIC4.58□□□□□ -1.68
LIM2P55344 RNU6-709P-201ENST00000517257 104 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.58□□□□□ -1.68
LIM2P55344 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.58□□□□□ -1.68
LIM2P55344 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 AP001922.4-201ENST00000526967 290 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.58□□□□□ -1.68
LIM2P55344 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.58□□□□□ -1.68
LIM2P55344 AC009117.1-201ENST00000563948 554 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC245128.3-201ENST00000594721 748 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC006363.1-201ENST00000603806 463 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC079791.1-201ENST00000605356 973 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AL121932.1-201ENST00000605542 214 ntBASIC4.58□□□□□ -1.68
LIM2P55344 AC012414.7-202ENST00000622705 1090 ntBASIC4.58□□□□□ -1.68
LIM2P55344 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIM2P55344 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LIM2P55344 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LIM2P55344 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 SMG1P6-201ENST00000532337 2930 ntBASIC4.57□□□□□ -1.68
LIM2P55344 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LIM2P55344 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LIM2P55344 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIM2P55344 DDX18P5-201ENST00000534547 1306 ntBASIC4.57□□□□□ -1.68
LIM2P55344 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 AC008549.2-201ENST00000333482 706 ntBASIC4.57□□□□□ -1.68
LIM2P55344 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 OR13C3-201ENST00000374781 1108 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AL445213.1-201ENST00000412589 747 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 AC114755.2-201ENST00000413520 361 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AC234781.4-201ENST00000419384 244 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AJ239321.1-201ENST00000424255 564 ntBASIC4.57□□□□□ -1.68
LIM2P55344 EIF4HP2-201ENST00000424380 563 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 AC007559.1-201ENST00000428736 355 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AL031584.1-201ENST00000447169 754 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LIM2P55344 RN7SL610P-201ENST00000463845 291 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.57□□□□□ -1.68
LIM2P55344 AC020890.1-201ENST00000491837 504 ntBASIC4.57□□□□□ -1.68
LIM2P55344 ATG10-AS1-201ENST00000504846 648 ntBASIC4.57□□□□□ -1.68
LIM2P55344 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LIM2P55344 AC026782.2-201ENST00000510845 636 ntBASIC4.57□□□□□ -1.68
LIM2P55344 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.57□□□□□ -1.68
LIM2P55344 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.57□□□□□ -1.68
LIM2P55344 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.57□□□□□ -1.68
LIM2P55344 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.57□□□□□ -1.68
LIM2P55344 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.57□□□□□ -1.68
LIM2P55344 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 BGLT3-201ENST00000564523 994 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.57□□□□□ -1.68
LIM2P55344 AC027281.1-201ENST00000574178 758 ntBASIC4.57□□□□□ -1.68
LIM2P55344 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.57□□□□□ -1.68
LIM2P55344 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 AC005084.1-201ENST00000605160 304 ntBASIC4.57□□□□□ -1.68
LIM2P55344 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.57□□□□□ -1.68
LIM2P55344 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.57□□□□□ -1.68
LIM2P55344 AL445528.2-201ENST00000620582 470 ntBASIC4.57□□□□□ -1.68
LIM2P55344 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LIM2P55344 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LIM2P55344 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LIM2P55344 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms