Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC073136.1-201ENST00000449426 2884 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 MAPK10-328ENST00000641553 4009 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLTCL1P53675 NPM1P37-201ENST00000403105 874 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 RPL7P32-201ENST00000457119 744 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 RPL7P19-201ENST00000469948 618 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLTCL1P53675 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLTCL1P53675 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLTCL1P53675 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLTCL1P53675 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.58□□□□□ -1.36
CLTCL1P53675 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.58□□□□□ -1.36
CLTCL1P53675 MIR1254-2-201ENST00000579553 63 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 AL445567.2-201ENST00000618935 498 ntBASIC6.58□□□□□ -1.36
CLTCL1P53675 AP000641.1-201ENST00000531988 1639 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.57□□□□□ -1.36
CLTCL1P53675 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLTCL1P53675 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CLTCL1P53675 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.57□□□□□ -1.36
CLTCL1P53675 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.57□□□□□ -1.36
CLTCL1P53675 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLTCL1P53675 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.57□□□□□ -1.36
CLTCL1P53675 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLTCL1P53675 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CLTCL1P53675 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CLTCL1P53675 RPS27AP12-201ENST00000429552 465 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 RPS29P17-201ENST00000430795 166 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 ISCUP1-201ENST00000454451 448 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 RPS27AP16-201ENST00000492222 470 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 AC098799.3-201ENST00000506095 438 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 AC108475.1-201ENST00000507880 950 ntBASIC6.57□□□□□ -1.36
CLTCL1P53675 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLTCL1P53675 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.57□□□□□ -1.36
CLTCL1P53675 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.57□□□□□ -1.36
CLTCL1P53675 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.57□□□□□ -1.36
CLTCL1P53675 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.57□□□□□ -1.36
CLTCL1P53675 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLTCL1P53675 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CLTCL1P53675 DDX18P5-201ENST00000534547 1306 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 RN7SKP27-201ENST00000410684 333 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.56□□□□□ -1.36
CLTCL1P53675 AL139095.3-201ENST00000419672 1203 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 RPL21P43-201ENST00000425440 472 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.56□□□□□ -1.36
CLTCL1P53675 AC090602.1-201ENST00000469695 252 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.56□□□□□ -1.36
CLTCL1P53675 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.56□□□□□ -1.36
CLTCL1P53675 AC021483.2-201ENST00000567415 758 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 AC127024.5-201ENST00000580085 462 ntBASIC6.56□□□□□ -1.36
CLTCL1P53675 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.56□□□□□ -1.36
CLTCL1P53675 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLTCL1P53675 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
CLTCL1P53675 AL731566.1-201ENST00000620490 1937 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.55□□□□□ -1.36
CLTCL1P53675 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 RN7SKP227-201ENST00000364445 330 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 SDHCP2-201ENST00000398565 501 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 RN7SKP263-201ENST00000411194 309 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 OR4C10P-201ENST00000434991 931 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 RPL23AP43-201ENST00000446445 471 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 AC239367.2-201ENST00000447309 705 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 AC104651.2-201ENST00000447549 528 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 RN7SL810P-201ENST00000493031 276 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 RN7SL691P-201ENST00000494487 301 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.55□□□□□ -1.36
CLTCL1P53675 AL359219.2-201ENST00000555184 348 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.55□□□□□ -1.36
CLTCL1P53675 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.55□□□□□ -1.36
CLTCL1P53675 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.55□□□□□ -1.36
CLTCL1P53675 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 AL020997.2-201ENST00000602607 184 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.55□□□□□ -1.36
CLTCL1P53675 BCORP1-203ENST00000513194 5093 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CLTCL1P53675 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.55□□□□□ -1.36
CLTCL1P53675 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CLTCL1P53675 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 AC083837.1-201ENST00000565297 2994 ntBASIC6.55□□□□□ -1.36
CLTCL1P53675 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.55□□□□□ -1.36
CLTCL1P53675 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CLTCL1P53675 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CLTCL1P53675 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.54□□□□□ -1.36
CLTCL1P53675 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CLTCL1P53675 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.54□□□□□ -1.36
CLTCL1P53675 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.54□□□□□ -1.36
CLTCL1P53675 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CLTCL1P53675 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms