Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL12P17-201ENST00000432393 498 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC007563.3-201ENST00000433233 371 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC093716.1-201ENST00000435923 377 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 MEMO1P4-201ENST00000453590 386 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 snoU13.20-201ENST00000459180 104 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC079080.1-201ENST00000479841 822 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 IGHV3-63-201ENST00000518422 341 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 IGKV1-32-201ENST00000519290 311 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC134698.5-201ENST00000519444 336 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
LIMK1P53667 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC068993.1-201ENST00000546724 589 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 PARP1P2-201ENST00000556806 195 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC104687.2-201ENST00000604442 342 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 AC019080.5-201ENST00000624891 757 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC009313.2-201ENST00000417893 1941 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AL451142.2-201ENST00000429076 2090 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LIMK1P53667 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LIMK1P53667 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.28□□□□□ -1.56
LIMK1P53667 AC011933.2-201ENST00000578539 2790 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 PHKBP1-201ENST00000450951 1951 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 SDAD1P1-202ENST00000524156 2051 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 AC126755.2-208ENST00000327792 462 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC138969.1-213ENST00000331436 462 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 RNU1-136P-201ENST00000384181 164 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 RNU6-225P-201ENST00000384613 103 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AL034374.1-201ENST00000406329 351 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.27□□□□□ -1.57
LIMK1P53667 AC019050.1-201ENST00000418508 492 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 RNF10P1-201ENST00000418589 369 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.27□□□□□ -1.57
LIMK1P53667 DDX39BP1-205ENST00000422507 192 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.27□□□□□ -1.57
LIMK1P53667 HSPD1P12-201ENST00000429127 1069 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC068287.1-201ENST00000430283 295 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 MTND2P21-201ENST00000436242 1042 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK1P53667 AL691517.1-201ENST00000440833 1235 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AL500527.1-201ENST00000448532 255 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.27□□□□□ -1.57
LIMK1P53667 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 AC103987.1-201ENST00000473394 348 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 UBA52P3-201ENST00000491303 382 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 AC021087.2-201ENST00000504656 1203 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 AC016550.3-201ENST00000515706 767 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.27□□□□□ -1.57
LIMK1P53667 AC026688.1-201ENST00000520639 1168 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 AC009117.1-201ENST00000563948 554 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.27□□□□□ -1.57
LIMK1P53667 MIR5096-201ENST00000583713 70 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.27□□□□□ -1.57
LIMK1P53667 AL513327.3-201ENST00000602618 469 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC019193.2-201ENST00000610012 634 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 AC079298.2-201ENST00000623885 459 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK1P53667 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 AL137141.1-201ENST00000624622 4836 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.27□□□□□ -1.57
LIMK1P53667 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
LIMK1P53667 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
LIMK1P53667 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 AL445437.1-201ENST00000623157 3087 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LIMK1P53667 ASNSP1-201ENST00000518311 1939 ntBASIC5.27□□□□□ -1.57
LIMK1P53667 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms