Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.71□□□□□ -1.5
NUP98P52948 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.71□□□□□ -1.5
NUP98P52948 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP98P52948 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.71□□□□□ -1.5
NUP98P52948 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP98P52948 NPM1P6-201ENST00000521088 871 ntBASIC5.71□□□□□ -1.5
NUP98P52948 OR8A2P-201ENST00000528631 952 ntBASIC5.71□□□□□ -1.5
NUP98P52948 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.71□□□□□ -1.5
NUP98P52948 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP98P52948 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP98P52948 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP98P52948 RNF138P2-201ENST00000603490 592 ntBASIC5.71□□□□□ -1.5
NUP98P52948 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.71□□□□□ -1.5
NUP98P52948 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP98P52948 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.71□□□□□ -1.5
NUP98P52948 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUP98P52948 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP98P52948 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP98P52948 RNA5SP366-201ENST00000365454 123 ntBASIC5.7□□□□□ -1.5
NUP98P52948 RPL21P43-201ENST00000425440 472 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.7□□□□□ -1.5
NUP98P52948 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP98P52948 OR4C10P-201ENST00000434991 931 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP98P52948 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP98P52948 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP98P52948 AC084783.1-201ENST00000565846 910 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.7□□□□□ -1.5
NUP98P52948 AC020634.1-201ENST00000608701 549 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AL731566.1-201ENST00000620490 1937 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AC025031.4-201ENST00000621248 3271 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AC140479.6-201ENST00000633535 357 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AP001153.1-201ENST00000641024 338 ntBASIC5.7□□□□□ -1.5
NUP98P52948 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP98P52948 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP98P52948 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP98P52948 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUP98P52948 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.7□□□□□ -1.5
NUP98P52948 AL158163.1-201ENST00000603915 1649 ntBASIC5.7□□□□□ -1.5
NUP98P52948 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.7□□□□□ -1.5
NUP98P52948 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUP98P52948 NDUFA5P1-201ENST00000433858 341 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP98P52948 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP98P52948 AC091167.1-201ENST00000492017 396 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AC098799.3-201ENST00000506095 438 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP98P52948 IGKV2D-10-201ENST00000520194 281 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP98P52948 AL023881.1-201ENST00000621088 301 ntBASIC5.69□□□□□ -1.5
NUP98P52948 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUP98P52948 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 AC109446.4-201ENST00000623235 2755 ntBASIC5.69□□□□□ -1.5
NUP98P52948 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUP98P52948 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUP98P52948 RPL23AP52-201ENST00000439311 478 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.69□□□□□ -1.5
NUP98P52948 AC105137.1-201ENST00000484355 562 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AC007224.1-201ENST00000564410 144 ntBASIC5.69□□□□□ -1.5
NUP98P52948 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.69□□□□□ -1.5
NUP98P52948 AL445567.2-201ENST00000618935 498 ntBASIC5.69□□□□□ -1.5
NUP98P52948 AC093297.3-201ENST00000607056 2517 ntBASIC5.69□□□□□ -1.5
NUP98P52948 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NUP98P52948 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUP98P52948 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP98P52948 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 AC104651.2-201ENST00000447549 528 ntBASIC5.68□□□□□ -1.5
NUP98P52948 AC090686.1-201ENST00000481577 749 ntBASIC5.68□□□□□ -1.5
NUP98P52948 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP98P52948 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP98P52948 MTCO1P35-201ENST00000515270 228 ntBASIC5.68□□□□□ -1.5
NUP98P52948 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.68□□□□□ -1.5
NUP98P52948 AL354984.3-201ENST00000604803 325 ntBASIC5.68□□□□□ -1.5
NUP98P52948 AP005019.3-201ENST00000620418 560 ntBASIC5.68□□□□□ -1.5
NUP98P52948 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUP98P52948 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP98P52948 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.68□□□□□ -1.5
NUP98P52948 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP98P52948 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP98P52948 RNA5SP317-201ENST00000410176 116 ntBASIC5.67□□□□□ -1.5
NUP98P52948 RNA5SP311-201ENST00000411290 116 ntBASIC5.67□□□□□ -1.5
NUP98P52948 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP98P52948 TCEA1P3-201ENST00000443005 880 ntBASIC5.67□□□□□ -1.5
NUP98P52948 PHBP16-201ENST00000446318 950 ntBASIC5.67□□□□□ -1.5
NUP98P52948 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms