Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL390318.1-201ENST00000624564 687 ntBASIC5.05□□□□□ -1.6
CENPAP49450 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.05□□□□□ -1.6
CENPAP49450 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.05□□□□□ -1.6
CENPAP49450 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.05□□□□□ -1.6
CENPAP49450 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 PWAR1-201ENST00000624188 2414 ntBASIC5.05□□□□□ -1.6
CENPAP49450 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CENPAP49450 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.05□□□□□ -1.6
CENPAP49450 MTCO1P18-201ENST00000455518 1419 ntBASIC5.05□□□□□ -1.6
CENPAP49450 AL592182.3-201ENST00000642132 3304 ntBASIC5.05□□□□□ -1.6
CENPAP49450 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CENPAP49450 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.05□□□□□ -1.6
CENPAP49450 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
CENPAP49450 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 PHKBP1-201ENST00000450951 1951 ntBASIC5.04□□□□□ -1.6
CENPAP49450 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CENPAP49450 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 RN7SKP145-201ENST00000363291 303 ntBASIC5.04□□□□□ -1.6
CENPAP49450 RNU6-666P-201ENST00000363499 107 ntBASIC5.04□□□□□ -1.6
CENPAP49450 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 U6.112-201ENST00000384129 70 ntBASIC5.04□□□□□ -1.6
CENPAP49450 U3.28-201ENST00000391249 210 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AL603865.2-201ENST00000401679 213 ntBASIC5.04□□□□□ -1.6
CENPAP49450 ZNF602P-201ENST00000405929 924 ntBASIC5.04□□□□□ -1.6
CENPAP49450 RNU2-50P-201ENST00000410494 143 ntBASIC5.04□□□□□ -1.6
CENPAP49450 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.04□□□□□ -1.6
CENPAP49450 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 AC105402.1-201ENST00000413336 545 ntBASIC5.04□□□□□ -1.6
CENPAP49450 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 OR6K4P-201ENST00000423179 955 ntBASIC5.04□□□□□ -1.6
CENPAP49450 DPY19L1P2-201ENST00000426647 915 ntBASIC5.04□□□□□ -1.6
CENPAP49450 BX323845.3-201ENST00000428215 527 ntBASIC5.04□□□□□ -1.6
CENPAP49450 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 GAPDHP48-201ENST00000436626 961 ntBASIC5.04□□□□□ -1.6
CENPAP49450 NDUFS5P5-201ENST00000437256 321 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.04□□□□□ -1.6
CENPAP49450 RPL34P26-201ENST00000445636 354 ntBASIC5.04□□□□□ -1.6
CENPAP49450 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 IGBP1P3-201ENST00000447449 1000 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC092685.1-201ENST00000447960 1243 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AL009048.1-201ENST00000450437 298 ntBASIC5.04□□□□□ -1.6
CENPAP49450 RPS4XP6-201ENST00000477670 797 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC073610.1-201ENST00000489971 396 ntBASIC5.04□□□□□ -1.6
CENPAP49450 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 IMPA1P1-201ENST00000510718 842 ntBASIC5.04□□□□□ -1.6
CENPAP49450 Y_RNA.667-201ENST00000516212 107 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 AC011611.5-201ENST00000552477 578 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.04□□□□□ -1.6
CENPAP49450 MTCYBP23-201ENST00000558717 1102 ntBASIC5.04□□□□□ -1.6
CENPAP49450 MIR4789-201ENST00000577469 82 ntBASIC5.04□□□□□ -1.6
CENPAP49450 RN7SL622P-201ENST00000585292 275 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC006116.5-201ENST00000591936 559 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC093673.2-201ENST00000609674 331 ntBASIC5.04□□□□□ -1.6
CENPAP49450 MIR6780B-201ENST00000610307 79 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AL162574.1-201ENST00000615702 950 ntBASIC5.04□□□□□ -1.6
CENPAP49450 CYCSP41-201ENST00000616920 296 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 AL078595.3-201ENST00000623815 1166 ntBASIC5.04□□□□□ -1.6
CENPAP49450 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CENPAP49450 CASC19-222ENST00000641321 1173 ntBASIC5.04□□□□□ -1.6
CENPAP49450 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
CENPAP49450 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CENPAP49450 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
CENPAP49450 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.04□□□□□ -1.6
CENPAP49450 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CENPAP49450 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms