Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LHX1P48742 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 AC109446.4-201ENST00000623235 2755 ntBASIC5.25□□□□□ -1.57
LHX1P48742 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX1P48742 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX1P48742 AL031595.2-201ENST00000624215 19071 ntBASIC5.25□□□□□ -1.57
LHX1P48742 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.24□□□□□ -1.57
LHX1P48742 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.24□□□□□ -1.57
LHX1P48742 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.24□□□□□ -1.57
LHX1P48742 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX1P48742 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 AC103591.2-201ENST00000265259 766 ntBASIC5.24□□□□□ -1.57
LHX1P48742 RNU4-39P-201ENST00000362455 127 ntBASIC5.24□□□□□ -1.57
LHX1P48742 RNA5SP87-201ENST00000384155 118 ntBASIC5.24□□□□□ -1.57
LHX1P48742 SNORD65-201ENST00000391079 73 ntBASIC5.24□□□□□ -1.57
LHX1P48742 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 GAPDHP15-201ENST00000398586 975 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX1P48742 SCAND3P1-201ENST00000439854 1060 ntBASIC5.24□□□□□ -1.57
LHX1P48742 MTCO3P43-201ENST00000440974 771 ntBASIC5.24□□□□□ -1.57
LHX1P48742 RBMY2TP-201ENST00000451162 947 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AP002345.1-201ENST00000456493 928 ntBASIC5.24□□□□□ -1.57
LHX1P48742 RPL23AP56-201ENST00000460778 453 ntBASIC5.24□□□□□ -1.57
LHX1P48742 EIF2S2P4-201ENST00000461070 984 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AC073073.1-201ENST00000493920 463 ntBASIC5.24□□□□□ -1.57
LHX1P48742 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.24□□□□□ -1.57
LHX1P48742 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 AC108157.1-201ENST00000510511 539 ntBASIC5.24□□□□□ -1.57
LHX1P48742 HMGB1P47-201ENST00000511281 589 ntBASIC5.24□□□□□ -1.57
LHX1P48742 Y_RNA.719-201ENST00000517156 106 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AC067904.2-201ENST00000517322 1283 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX1P48742 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX1P48742 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
LHX1P48742 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX1P48742 DUX4L52-201ENST00000549363 777 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX1P48742 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX1P48742 MIMT1-201ENST00000597105 1050 ntBASIC5.24□□□□□ -1.57
LHX1P48742 AC104687.2-201ENST00000604442 342 ntBASIC5.24□□□□□ -1.57
LHX1P48742 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX1P48742 AL158062.1-201ENST00000619632 745 ntBASIC5.24□□□□□ -1.57
LHX1P48742 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX1P48742 FRG1EP-201ENST00000634469 770 ntBASIC5.24□□□□□ -1.57
LHX1P48742 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX1P48742 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 TCP11X1-202ENST00000622971 1372 ntBASIC5.24□□□□□ -1.57
LHX1P48742 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX1P48742 AC020633.1-201ENST00000468439 2247 ntBASIC5.24□□□□□ -1.57
LHX1P48742 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX1P48742 AC104623.2-202ENST00000623477 4002 ntBASIC5.24□□□□□ -1.57
LHX1P48742 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LHX1P48742 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.23□□□□□ -1.57
LHX1P48742 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX1P48742 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.23□□□□□ -1.57
LHX1P48742 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LHX1P48742 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 RPL10P10-201ENST00000403509 664 ntBASIC5.23□□□□□ -1.57
LHX1P48742 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.23□□□□□ -1.57
LHX1P48742 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 QRSL1P2-201ENST00000418582 964 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AC013429.2-201ENST00000418798 781 ntBASIC5.23□□□□□ -1.57
LHX1P48742 MTATP6P11-201ENST00000428071 670 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AL360081.1-201ENST00000428299 555 ntBASIC5.23□□□□□ -1.57
LHX1P48742 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.23□□□□□ -1.57
LHX1P48742 MTND4LP14-201ENST00000429447 288 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AL049745.1-201ENST00000433953 286 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AC008072.1-201ENST00000434254 824 ntBASIC5.23□□□□□ -1.57
LHX1P48742 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX1P48742 RPS15AP29-201ENST00000445539 400 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AL161722.1-201ENST00000446972 1032 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX1P48742 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX1P48742 AC105233.1-201ENST00000498840 781 ntBASIC5.23□□□□□ -1.57
LHX1P48742 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.23□□□□□ -1.57
LHX1P48742 ACTR6P1-201ENST00000514311 1104 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX1P48742 MORF4L1P3-201ENST00000525966 950 ntBASIC5.23□□□□□ -1.57
LHX1P48742 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.23□□□□□ -1.57
LHX1P48742 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms