Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEDD4P46934 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.54□□□□□ -1.52
NEDD4P46934 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEDD4P46934 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.54□□□□□ -1.52
NEDD4P46934 RN7SKP106-201ENST00000410832 272 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 AC140479.3-201ENST00000418944 1126 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 TDGF1P1-201ENST00000445734 527 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.54□□□□□ -1.52
NEDD4P46934 RN7SL354P-201ENST00000469282 294 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.54□□□□□ -1.52
NEDD4P46934 RNU4-18P-201ENST00000516751 149 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC008147.3-201ENST00000548666 354 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.54□□□□□ -1.52
NEDD4P46934 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.54□□□□□ -1.52
NEDD4P46934 AC087283.1-201ENST00000604029 1074 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 MIR8069-1-201ENST00000616627 86 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 MIR8069-2-201ENST00000621412 86 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEDD4P46934 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 AL031119.1-201ENST00000404707 1879 ntBASIC5.54□□□□□ -1.52
NEDD4P46934 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NEDD4P46934 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.54□□□□□ -1.52
NEDD4P46934 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NEDD4P46934 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.54□□□□□ -1.52
NEDD4P46934 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NEDD4P46934 ZFRP1-201ENST00000457579 2970 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 RNA5SP505-201ENST00000364748 108 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 AP000580.1-201ENST00000404439 358 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 CASKP1-201ENST00000412870 582 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AL359265.2-201ENST00000434367 631 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.53□□□□□ -1.52
NEDD4P46934 AC011753.3-201ENST00000443436 406 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AL513533.1-201ENST00000453728 415 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AC026782.2-201ENST00000510845 636 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.53□□□□□ -1.52
NEDD4P46934 AC063949.1-201ENST00000552900 865 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.53□□□□□ -1.52
NEDD4P46934 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 RN7SL652P-201ENST00000577769 300 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.53□□□□□ -1.52
NEDD4P46934 RNF138P2-201ENST00000603490 592 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 AL133406.3-201ENST00000606817 541 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 OR7A19P-201ENST00000608051 733 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.53□□□□□ -1.52
NEDD4P46934 MIR6780A-201ENST00000615089 68 ntBASIC5.53□□□□□ -1.52
NEDD4P46934 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
NEDD4P46934 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.53□□□□□ -1.52
NEDD4P46934 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NEDD4P46934 AC097461.1-201ENST00000568928 2821 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NEDD4P46934 AL049697.2-201ENST00000403708 294 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 AL592291.1-201ENST00000403830 352 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 AL590139.1-201ENST00000416267 400 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 RANP7-201ENST00000418085 644 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 EIF4A1P1-201ENST00000420241 934 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NEDD4P46934 AC013410.1-201ENST00000436223 1232 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.52□□□□□ -1.53
NEDD4P46934 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.52□□□□□ -1.53
NEDD4P46934 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.52□□□□□ -1.53
NEDD4P46934 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.52□□□□□ -1.53
NEDD4P46934 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.52□□□□□ -1.53
NEDD4P46934 IGKV1-32-201ENST00000519290 311 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.52□□□□□ -1.53
NEDD4P46934 AP006289.1-201ENST00000538089 277 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.52□□□□□ -1.53
NEDD4P46934 uc_338.18-201ENST00000615451 175 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 BNIP3P41-202ENST00000616656 861 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 AC020763.5-201ENST00000623298 430 ntBASIC5.52□□□□□ -1.53
NEDD4P46934 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.52□□□□□ -1.53
NEDD4P46934 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.52□□□□□ -1.53
NEDD4P46934 TCP1P3-201ENST00000414406 1498 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms