Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 BCAS2P1-201ENST00000528022 632 ntBASIC5.5□□□□□ -1.53
CD40P25942 AP002963.1-201ENST00000530590 184 ntBASIC5.5□□□□□ -1.53
CD40P25942 TOMM20P1-201ENST00000534518 427 ntBASIC5.5□□□□□ -1.53
CD40P25942 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CD40P25942 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.5□□□□□ -1.53
CD40P25942 AC068714.1-201ENST00000559623 800 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.5□□□□□ -1.53
CD40P25942 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 AC005332.4-201ENST00000592752 579 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 AC090181.2-201ENST00000602975 672 ntBASIC5.5□□□□□ -1.53
CD40P25942 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC073648.5-201ENST00000603502 305 ntBASIC5.5□□□□□ -1.53
CD40P25942 AL499605.1-201ENST00000604628 403 ntBASIC5.5□□□□□ -1.53
CD40P25942 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD40P25942 AC243654.2-201ENST00000612843 443 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC073968.1-201ENST00000618594 637 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC009509.4-201ENST00000619202 509 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC015804.1-201ENST00000622935 435 ntBASIC5.5□□□□□ -1.53
CD40P25942 AC120349.2-201ENST00000625002 298 ntBASIC5.5□□□□□ -1.53
CD40P25942 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CD40P25942 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CD40P25942 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.5□□□□□ -1.53
CD40P25942 CASC19-204ENST00000641001 2055 ntBASIC5.5□□□□□ -1.53
CD40P25942 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD40P25942 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.5□□□□□ -1.53
CD40P25942 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.5□□□□□ -1.53
CD40P25942 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD40P25942 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.5□□□□□ -1.53
CD40P25942 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD40P25942 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CD40P25942 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CD40P25942 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CD40P25942 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 OR5BR1P-201ENST00000524992 1330 ntBASIC5.49□□□□□ -1.53
CD40P25942 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 AC068733.2-201ENST00000605434 1418 ntBASIC5.49□□□□□ -1.53
CD40P25942 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 AC013488.1-201ENST00000526618 1838 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC022031.1-201ENST00000585985 2593 ntBASIC5.49□□□□□ -1.53
CD40P25942 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 AL121657.1-201ENST00000327215 531 ntBASIC5.49□□□□□ -1.53
CD40P25942 SUGT1P2-201ENST00000379452 992 ntBASIC5.49□□□□□ -1.53
CD40P25942 Y_RNA.517-201ENST00000384551 106 ntBASIC5.49□□□□□ -1.53
CD40P25942 AL360271.1-201ENST00000395679 510 ntBASIC5.49□□□□□ -1.53
CD40P25942 EI24P3-201ENST00000399046 1062 ntBASIC5.49□□□□□ -1.53
CD40P25942 DEFB108C-201ENST00000400154 252 ntBASIC5.49□□□□□ -1.53
CD40P25942 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 RNU2-65P-201ENST00000410162 185 ntBASIC5.49□□□□□ -1.53
CD40P25942 RPS21P8-201ENST00000413365 247 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.49□□□□□ -1.53
CD40P25942 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 AL022331.1-201ENST00000429025 477 ntBASIC5.49□□□□□ -1.53
CD40P25942 RPSAP65-201ENST00000429660 595 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 IGLV3-4-201ENST00000432300 244 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.49□□□□□ -1.53
CD40P25942 B3GNT2P1-201ENST00000434960 952 ntBASIC5.49□□□□□ -1.53
CD40P25942 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 CDC27P1-201ENST00000445384 715 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 AC108463.1-201ENST00000450258 347 ntBASIC5.49□□□□□ -1.53
CD40P25942 CFTRP1-201ENST00000456646 183 ntBASIC5.49□□□□□ -1.53
CD40P25942 RPL12P30-201ENST00000488389 499 ntBASIC5.49□□□□□ -1.53
CD40P25942 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 PFN1P8-201ENST00000497012 543 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC108078.3-201ENST00000502633 489 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC107401.1-201ENST00000503426 685 ntBASIC5.49□□□□□ -1.53
CD40P25942 SNX18P24-201ENST00000505249 671 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC113430.1-201ENST00000506872 718 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 AC109458.1-201ENST00000508858 316 ntBASIC5.49□□□□□ -1.53
CD40P25942 MTCYBP43-201ENST00000513621 740 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC027309.2-201ENST00000520566 192 ntBASIC5.49□□□□□ -1.53
CD40P25942 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.49□□□□□ -1.53
CD40P25942 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.49□□□□□ -1.53
CD40P25942 AC074051.3-201ENST00000570238 358 ntBASIC5.49□□□□□ -1.53
CD40P25942 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD40P25942 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.49□□□□□ -1.53
CD40P25942 AC020914.6-201ENST00000594327 272 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC079089.3-201ENST00000603094 673 ntBASIC5.49□□□□□ -1.53
CD40P25942 AC083899.3-201ENST00000603413 594 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms