Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.65□□□□□ -1.51
HOXC6P09630 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXC6P09630 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.65□□□□□ -1.51
HOXC6P09630 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
HOXC6P09630 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC6P09630 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HOXC6P09630 RNU6-925P-201ENST00000384629 104 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 MIR620-201ENST00000385232 95 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 RNA5SP241-201ENST00000391326 114 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXC6P09630 AC017078.1-201ENST00000416146 368 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC007064.3-201ENST00000422608 359 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC6P09630 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 RPS27AP6-201ENST00000427962 448 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 NDUFA5P1-201ENST00000433858 341 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC6P09630 RNF2P1-201ENST00000442955 1010 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC6P09630 AC103987.1-201ENST00000473394 348 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXC6P09630 AK3P4-201ENST00000504283 583 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC6P09630 AC119751.4-201ENST00000507498 357 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC025768.1-201ENST00000510057 267 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC098976.1-201ENST00000513014 541 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HOXC6P09630 RNA5SP392-201ENST00000516905 112 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC6P09630 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC6P09630 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC6P09630 AC012339.2-201ENST00000523996 453 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AC009643.1-201ENST00000532030 391 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXC6P09630 TOMM20P2-201ENST00000540082 421 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXC6P09630 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC6P09630 PARP1P2-201ENST00000556806 195 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXC6P09630 AC022960.3-201ENST00000619794 441 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC6P09630 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXC6P09630 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXC6P09630 KARSP3-201ENST00000571212 1504 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 AP001002.1-201ENST00000625148 1513 ntBASIC5.64□□□□□ -1.51
HOXC6P09630 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
HOXC6P09630 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC6P09630 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC6P09630 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC6P09630 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC6P09630 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC6P09630 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HOXC6P09630 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC6P09630 RNU6-819P-201ENST00000364116 107 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
HOXC6P09630 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXC6P09630 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC6P09630 HYALP1-201ENST00000417674 1279 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 MTATP6P17-201ENST00000431030 672 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC6P09630 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC6P09630 AL645638.1-201ENST00000440519 361 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 RPL10P17-201ENST00000453852 316 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 RPL12P20-201ENST00000475538 479 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC6P09630 SCARNA22-201ENST00000503991 125 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 MTND3P24-201ENST00000506306 329 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 HMGN1P15-201ENST00000513870 295 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC6P09630 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC6P09630 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC6P09630 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC6P09630 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC6P09630 AC023158.1-201ENST00000561632 1025 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 LINC00557-201ENST00000563184 1279 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 MIR4715-201ENST00000584117 79 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 OR1AB1P-201ENST00000585564 761 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXC6P09630 AC040174.2-201ENST00000602701 465 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 AC098935.2-201ENST00000604222 466 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 AC117490.2-201ENST00000610042 594 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXC6P09630 MIR6853-201ENST00000619642 74 ntBASIC5.63□□□□□ -1.51
HOXC6P09630 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms