Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CD24P2-201ENST00000565486 219 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL1P09341 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.65□□□□□ -1.83
CXCL1P09341 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.65□□□□□ -1.83
CXCL1P09341 AC069307.1-201ENST00000602820 447 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC3.65□□□□□ -1.83
CXCL1P09341 AC096553.1-201ENST00000605169 829 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 AL031666.3-201ENST00000609320 1006 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 AL591926.8-201ENST00000616876 211 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 AL023881.1-201ENST00000621088 301 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 AL691477.1-201ENST00000624398 162 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 AC107021.2-201ENST00000567714 2095 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.65□□□□□ -1.83
CXCL1P09341 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.65□□□□□ -1.83
CXCL1P09341 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL1P09341 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL1P09341 AC018555.1-201ENST00000567548 1980 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CXCL1P09341 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL1P09341 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CXCL1P09341 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CXCL1P09341 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CXCL1P09341 AC027290.2-201ENST00000623210 18662 ntBASIC3.65□□□□□ -1.83
CXCL1P09341 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CXCL1P09341 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL1P09341 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.64□□□□□ -1.83
CXCL1P09341 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 RN7SKP124-201ENST00000364730 341 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL1P09341 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 SNORA70.10-201ENST00000384515 134 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CXCL1P09341 AL021331.1-201ENST00000402817 582 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AL136116.2-201ENST00000404020 785 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.64□□□□□ -1.83
CXCL1P09341 AL390774.1-201ENST00000411924 246 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 DDX39BP1-205ENST00000422507 192 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC106901.1-201ENST00000425086 698 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AL390119.1-201ENST00000440329 312 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 KNOP1P3-201ENST00000446933 426 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC090142.2-201ENST00000483263 416 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC008897.1-201ENST00000494006 347 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC006499.4-201ENST00000510947 694 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 Vault.2-201ENST00000516519 98 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 SCARNA21.2-201ENST00000516600 166 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.64□□□□□ -1.83
CXCL1P09341 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 TOMM20P1-201ENST00000534518 427 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC134349.2-201ENST00000535136 910 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 NANOGNBP2-201ENST00000544753 553 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC126177.5-201ENST00000549599 178 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC122134.1-201ENST00000565664 1104 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC134669.1-201ENST00000581275 672 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 FO393422.1-201ENST00000603908 708 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL1P09341 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.64□□□□□ -1.83
CXCL1P09341 CYP4F35P-202ENST00000636121 390 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CXCL1P09341 AC235565.1-201ENST00000456962 1325 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 AC105074.1-201ENST00000623380 3095 ntBASIC3.64□□□□□ -1.83
CXCL1P09341 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
CXCL1P09341 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.64□□□□□ -1.83
CXCL1P09341 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL1P09341 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CXCL1P09341 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CXCL1P09341 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CXCL1P09341 AC093535.2-201ENST00000624769 2326 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms