Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 EIF2AP4-201ENST00000424793 1781 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 DDX18P5-201ENST00000534547 1306 ntBASIC5.54□□□□□ -1.52
COL4A1P02462 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A1P02462 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A1P02462 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 AC097374.1-203ENST00000400783 485 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL4A1P02462 RN7SL810P-201ENST00000493031 276 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A1P02462 AC007224.1-201ENST00000564410 144 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 RN7SL703P-201ENST00000578485 302 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 ZYXP1-201ENST00000617638 118 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A1P02462 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A1P02462 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A1P02462 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
COL4A1P02462 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 CASC19-206ENST00000641028 1430 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A1P02462 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL4A1P02462 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 AC097063.1-201ENST00000426714 1797 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL4A1P02462 AC108467.2-201ENST00000617640 1597 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL4A1P02462 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
COL4A1P02462 MIR383-201ENST00000362257 73 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AL022722.2-201ENST00000402519 180 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A1P02462 PHBP16-201ENST00000446318 950 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 RN7SL303P-201ENST00000469773 251 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AC105137.1-201ENST00000484355 562 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 AP000827.1-201ENST00000527814 258 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A1P02462 RN7SL600P-201ENST00000581811 299 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 MIR4660-201ENST00000583549 74 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 AL445363.3-201ENST00000623080 671 ntBASIC5.53□□□□□ -1.52
COL4A1P02462 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A1P02462 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
COL4A1P02462 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A1P02462 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL4A1P02462 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
COL4A1P02462 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 ASNSP1-204ENST00000641977 1664 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A1P02462 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A1P02462 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL4A1P02462 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL4A1P02462 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL4A1P02462 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
COL4A1P02462 RAB9AP4-201ENST00000415230 609 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 EEF1A1P1-201ENST00000447052 739 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 AC007537.2-201ENST00000472093 511 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A1P02462 AC090515.3-201ENST00000560431 315 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A1P02462 MIR492-201ENST00000638676 116 ntBASIC5.52□□□□□ -1.53
COL4A1P02462 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A1P02462 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A1P02462 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A1P02462 AC099654.3-201ENST00000447087 1546 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 OR5P1P-201ENST00000299512 925 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 RNU1-94P-201ENST00000362627 173 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 RN7SKP227-201ENST00000364445 330 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 AL356095.1-201ENST00000417217 199 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 AC114495.1-201ENST00000441274 436 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A1P02462 UQCRHP4-201ENST00000471686 272 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A1P02462 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A1P02462 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A1P02462 RPL7P50-201ENST00000600588 727 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 AC024941.1-201ENST00000612250 334 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 AC245389.2-201ENST00000616023 576 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 AC242843.1-201ENST00000618702 573 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A1P02462 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A1P02462 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL4A1P02462 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A1P02462 PCAT14-202ENST00000627127 3935 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 LARP1BP1-201ENST00000506036 1359 ntBASIC5.51□□□□□ -1.53
COL4A1P02462 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
COL4A1P02462 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A1P02462 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A1P02462 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
COL4A1P02462 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms