Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 AC097063.1-201ENST00000426714 1797 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AL138820.1-201ENST00000617901 5305 ntBASIC5.43□□□□□ -1.54
MSI1O43347 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 RNA5SP90-201ENST00000364801 99 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 RNU6-796P-201ENST00000391086 107 ntBASIC5.43□□□□□ -1.54
MSI1O43347 VN1R51P-201ENST00000411675 945 ntBASIC5.43□□□□□ -1.54
MSI1O43347 CBX1P3-201ENST00000413296 527 ntBASIC5.43□□□□□ -1.54
MSI1O43347 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.43□□□□□ -1.54
MSI1O43347 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.43□□□□□ -1.54
MSI1O43347 FO393414.1-201ENST00000428697 1184 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.43□□□□□ -1.54
MSI1O43347 AC006994.1-201ENST00000438212 839 ntBASIC5.43□□□□□ -1.54
MSI1O43347 RPL7P33-201ENST00000444159 742 ntBASIC5.43□□□□□ -1.54
MSI1O43347 RPL7P55-201ENST00000450522 746 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.43□□□□□ -1.54
MSI1O43347 AC092691.2-201ENST00000461787 803 ntBASIC5.43□□□□□ -1.54
MSI1O43347 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 CYCSP20-201ENST00000473154 315 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.43□□□□□ -1.54
MSI1O43347 OR5H3P-201ENST00000502817 919 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC069306.1-201ENST00000507006 843 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC021146.7-201ENST00000509604 775 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC021193.1-201ENST00000511607 420 ntBASIC5.43□□□□□ -1.54
MSI1O43347 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.43□□□□□ -1.54
MSI1O43347 EIF3KP3-201ENST00000514461 639 ntBASIC5.43□□□□□ -1.54
MSI1O43347 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.43□□□□□ -1.54
MSI1O43347 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.43□□□□□ -1.54
MSI1O43347 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.43□□□□□ -1.54
MSI1O43347 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.43□□□□□ -1.54
MSI1O43347 AC044860.2-201ENST00000561005 179 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.43□□□□□ -1.54
MSI1O43347 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.43□□□□□ -1.54
MSI1O43347 RN7SL708P-201ENST00000580952 299 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC008507.2-201ENST00000588402 1176 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC095055.1-201ENST00000603472 1113 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC009597.2-201ENST00000604659 592 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AL121612.2-201ENST00000612261 482 ntBASIC5.43□□□□□ -1.54
MSI1O43347 RPSAP73-201ENST00000614820 330 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC126544.2-201ENST00000625174 749 ntBASIC5.43□□□□□ -1.54
MSI1O43347 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.43□□□□□ -1.54
MSI1O43347 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
MSI1O43347 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 AC090220.1-201ENST00000593078 1699 ntBASIC5.43□□□□□ -1.54
MSI1O43347 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
MSI1O43347 AL034549.2-201ENST00000618285 3373 ntBASIC5.42□□□□□ -1.54
MSI1O43347 AC114947.2-201ENST00000565748 2125 ntBASIC5.42□□□□□ -1.54
MSI1O43347 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.42□□□□□ -1.54
MSI1O43347 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 ZNF90P1-201ENST00000480493 1951 ntBASIC5.42□□□□□ -1.54
MSI1O43347 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.42□□□□□ -1.54
MSI1O43347 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.42□□□□□ -1.54
MSI1O43347 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MSI1O43347 RNA5SP443-201ENST00000363083 132 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RNU6-252P-201ENST00000363232 107 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RNA5SP507-201ENST00000363603 121 ntBASIC5.42□□□□□ -1.54
MSI1O43347 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
MSI1O43347 RNU6-354P-201ENST00000383862 107 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RNU6-610P-201ENST00000384264 107 ntBASIC5.42□□□□□ -1.54
MSI1O43347 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MSI1O43347 U3.36-201ENST00000408418 213 ntBASIC5.42□□□□□ -1.54
MSI1O43347 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MSI1O43347 AL158825.1-201ENST00000414735 521 ntBASIC5.42□□□□□ -1.54
MSI1O43347 TCEA1P2-201ENST00000420496 906 ntBASIC5.42□□□□□ -1.54
MSI1O43347 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
MSI1O43347 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 RPS4XP16-201ENST00000427198 791 ntBASIC5.42□□□□□ -1.54
MSI1O43347 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 MTCYBP15-201ENST00000433123 1127 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RPL19P16-201ENST00000433839 588 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RPS29P10-201ENST00000439197 166 ntBASIC5.42□□□□□ -1.54
MSI1O43347 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.42□□□□□ -1.54
MSI1O43347 AC090804.1-201ENST00000448870 490 ntBASIC5.42□□□□□ -1.54
MSI1O43347 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.42□□□□□ -1.54
MSI1O43347 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.42□□□□□ -1.54
MSI1O43347 AC092647.2-201ENST00000452998 253 ntBASIC5.42□□□□□ -1.54
MSI1O43347 AC008379.1-201ENST00000463655 464 ntBASIC5.42□□□□□ -1.54
MSI1O43347 AC090114.3-201ENST00000479267 829 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RPSAP50-201ENST00000481955 852 ntBASIC5.42□□□□□ -1.54
MSI1O43347 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.42□□□□□ -1.54
MSI1O43347 RPS12P31-201ENST00000491419 398 ntBASIC5.42□□□□□ -1.54
MSI1O43347 RPS26P24-201ENST00000497656 331 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms