Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mbd3l1Q9D9H3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Gm43566-201ENSMUST00000196851 808 ntBASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.51□□□□□ -0.09
Mbd3l1Q9D9H3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Mbd3l1Q9D9H3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Mbd3l1Q9D9H3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mbd3l1Q9D9H3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms