Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gm6576-201ENSMUST00000169678 883 ntBASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gm27405-201ENSMUST00000184201 112 ntBASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Rab40cQ8VHQ4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab40cQ8VHQ4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Gm10138-203ENSMUST00000206952 366 ntBASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.67□□□□□ -0.22
Rab40cQ8VHQ4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40cQ8VHQ4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms