Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.08■□□□□ 0
Rab40bQ8VHP8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.08■□□□□ 0
Rab40bQ8VHP8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rab40bQ8VHP8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.07■□□□□ 0
Rab40bQ8VHP8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.07■□□□□ 0
Rab40bQ8VHP8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rab40bQ8VHP8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Dio3-201ENSMUST00000097228 1449 ntBASIC15.07■□□□□ 0
Rab40bQ8VHP8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rab40bQ8VHP8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.06■□□□□ 0
Rab40bQ8VHP8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.06■□□□□ 0
Rab40bQ8VHP8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rab40bQ8VHP8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.05■□□□□ 0
Rab40bQ8VHP8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rab40bQ8VHP8 Gm18284-201ENSMUST00000172604 624 ntBASIC15.05■□□□□ -0
Rab40bQ8VHP8 Gm26571-201ENSMUST00000181399 666 ntBASIC15.05■□□□□ -0
Rab40bQ8VHP8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rab40bQ8VHP8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.04■□□□□ -0
Rab40bQ8VHP8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rab40bQ8VHP8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms